RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 EVI2BP34910 448 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 VPS41P49754 854 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ALDH5A1P51649 535 aaPredicted RBP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CDK17Q00537 523 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 TFAP4Q01664 338 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 GSTM4Q03013 218 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 TUBA3CQ13748 450 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 PSMD6Q15008 389 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 C2orf27AQ580R0 203 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 HSP90AA5PQ58FG0 334 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 TTBK2Q6IQ55 1244 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CLEC2AQ6UVW9 174 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ERICH1Q86X53 443 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ALDH16A1Q8IZ83 802 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 GJD3Q8N144 294 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ANKRD52Q8NB46 1076 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 PCSK9Q8NBP7 692 aaKnown RBP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 DEPTORQ8TB45 409 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC110Q8TBZ0 833 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 RPGRIP1Q96KN7 1286 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 TBATAQ96M53 351 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CTAGE1Q96RT6 745 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 PIGSQ96S52 555 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 VCXQ9H320 206 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 CBX8Q9HC52 389 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ATP13A1Q9HD20 1204 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ITM2CQ9NQX7 267 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 SEPT11Q9NVA2 429 aaKnown RBP5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ANO10Q9NW15 660 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 COQ3Q9NZJ6 369 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 ADAMTS8Q9UP79 889 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 MSRB2Q9Y3D2 182 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 RWDD3Q9Y3V2 267 aa5.37□□□□□ -1.55
UBE3D-202ENST00000369746 PRR5-ARHGAP8B1AHC4 643 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 VWA5AO00534 786 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 CAPN9O14815 690 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 HDAC3O15379 428 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 IDH3BO43837 385 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 USO1O60763 962 aaKnown RBP5.36□□□□□ -1.55
UBE3D-202ENST00000369746 ATP6V1G2O95670 118 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 EYA4O95677 639 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 HEXBP07686 556 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 CYP2A6P11509 494 aaPredicted RBP5.36□□□□□ -1.55
UBE3D-202ENST00000369746 RPS2P15880 293 aaKnown RBP5.36□□□□□ -1.55
UBE3D-202ENST00000369746 MLH1P40692 756 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 LIFRP42702 1097 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 ID4P47928 161 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 ARHGAP8P85298 464 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 TRPC3Q13507 836 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PKP1Q13835 747 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PI16Q6UXB8 463 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 DLK2Q6UY11 383 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 NLRP9Q7RTR0 991 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 MAMDC2Q7Z304 686 aaPredicted RBP5.36□□□□□ -1.55
UBE3D-202ENST00000369746 HID1Q8IV36 788 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PASD1Q8IV76 773 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 KLHDC9Q8NEP7 349 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 RFWD2Q8NHY2 731 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 AZIN2Q96A70 460 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 NRBF2Q96F24 287 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 IFT43Q96FT9 208 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 SNF8Q96H20 258 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 ADPGKQ9BRR6 497 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PHF20Q9BVI0 1012 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 NUP58Q9BVL2 599 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 ACAT2Q9BWD1 397 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 TRPV6Q9H1D0 765 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 MROH8Q9H579 483 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 TRPV4Q9HBA0 871 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PARVGQ9HBI0 331 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PCMTD2Q9NV79 361 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 DDX19BQ9UMR2 479 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 MYH13Q9UKX3 1938 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PNMA6FA0A0J9YX94 578 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 E2F3O00716 465 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 OLFM2O95897 454 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 SYF2O95926 243 aaKnown RBP5.36□□□□□ -1.55
UBE3D-202ENST00000369746 RHOXF2BP0C7M4 288 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 STMN1P16949 149 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 TFEBP19484 476 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 USP14P54578 494 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 GTF2IP78347 998 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 IFI16Q16666 785 aaKnown RBP5.36□□□□□ -1.55
UBE3D-202ENST00000369746 LETM2Q2VYF4 491 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PRAMEF18Q5VWM3 479 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 ZNF365Q70YC5 407 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 CHD1LQ86WJ1 897 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 ZBTB44Q8NCP5 570 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 ADAMTS18Q8TE60 1221 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 DYDC1Q8WWB3 177 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 BADQ92934 168 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 NXPE3Q969Y0 559 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 MFSD3Q96ES6 412 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 FAM167AQ96KS9 214 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 UBXN10Q96LJ8 280 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 C19orf43Q9BQ61 176 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 RHOXF2Q9BQY4 288 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 MXD3Q9BW11 206 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 TARS2Q9BW92 718 aaKnown RBP5.36□□□□□ -1.55
UBE3D-202ENST00000369746 RBCK1Q9BYM8 510 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms