RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 SH3BGRP55822 239 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-203ENST00000368690 POLE2P56282 527 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 KRT39Q6A163 491 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 TATDN1Q6P1N9 297 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 GSTA5Q7RTV2 222 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 ARHGAP22Q7Z5H3 698 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 ZNF677Q86XU0 584 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 GMCL1P1Q8NEA9 526 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 ZBED3Q96IU2 234 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-203ENST00000368690 NT5C1BQ96P26 610 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 CBWD1Q9BRT8 395 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 MAK16Q9BXY0 300 aaKnown RBP18.35■□□□□ 0.53
CHTOP-203ENST00000368690 SHOC2Q9UQ13 582 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 NUMBLQ9Y6R0 609 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 ASTN2O75129 1339 aaPredicted RBP18.35■□□□□ 0.53
CHTOP-203ENST00000368690 GAS7O60861 476 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 BMP3P12645 472 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 CETN2P41208 172 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 GEMIN4P57678 1058 aaKnown RBP18.35■□□□□ 0.53
CHTOP-203ENST00000368690 CDK16Q00536 496 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 B3GNT9Q6UX72 402 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 FAM83AQ86UY5 434 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 VPS52Q8N1B4 723 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 SEMA4DQ92854 862 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 ITFG2Q969R8 447 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 TMEM8AQ9HCN3 771 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 IL1RAPL1Q9NZN1 696 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 HEY2Q9UBP5 337 aa18.35■□□□□ 0.53
CHTOP-203ENST00000368690 HERC5Q9UII4 1024 aaKnown RBP18.35■□□□□ 0.53
CHTOP-203ENST00000368690 MAGEC1O60732 1142 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 GH2P01242 217 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 EAPPQ56P03 285 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-203ENST00000368690 FKBP1CQ5VVH2 108 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 CENPUQ71F23 418 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 GPC2Q8N158 579 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 RFWD2Q8NHY2 731 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-203ENST00000368690 EZH1Q92800 747 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-203ENST00000368690 DHRS4Q9BTZ2 278 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 HEMGNQ9BXL5 484 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 VPS37BQ9H9H4 285 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 WRAP73Q9P2S5 460 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-203ENST00000368690 DRG1Q9Y295 367 aaKnown RBP18.34■□□□□ 0.53
CHTOP-203ENST00000368690 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
CHTOP-203ENST00000368690 A0A1W2PPM1 405 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 LIASO43766 372 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 RARBP10826 455 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 KRT4P19013 534 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 GTF2H1P32780 548 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 TNFAIP1Q13829 316 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 USH1GQ495M9 461 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 CCDC62Q6P9F0 684 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 CHSY1Q86X52 802 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 EPAS1Q99814 870 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 MANSC1Q9H8J5 431 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 KRT82Q9NSB4 513 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 TAS2R1Q9NYW7 299 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 HACL1Q9UJ83 578 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 POLIQ9UNA4 740 aa18.34■□□□□ 0.53
CHTOP-203ENST00000368690 CFAP69A5D8W1 941 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 CHMP2AO43633 222 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 HOXA13P31271 388 aaPredicted RBP18.33■□□□□ 0.52
CHTOP-203ENST00000368690 ARFIP2P53365 341 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 GTF2BQ00403 316 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 ENPEPQ07075 957 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 SEPT7Q16181 437 aaKnown RBP18.33■□□□□ 0.52
CHTOP-203ENST00000368690 ADGRD1Q6QNK2 874 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 PADI6Q6TGC4 694 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 ALLCQ8N6M5 410 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 VCX3BQ9H321 246 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 VCX3AQ9NNX9 186 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 PCMTD2Q9NV79 361 aa18.33■□□□□ 0.52
CHTOP-203ENST00000368690 ADRA1DP25100 572 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 PHBP35232 272 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 GCNT1Q02742 428 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 TMC2Q8TDI7 906 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 RBM41Q96IZ5 413 aaKnown RBP18.32■□□□□ 0.52
CHTOP-203ENST00000368690 LXNQ9BS40 222 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 PPP1R12CQ9BZL4 782 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 SBF1O95248 1867 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 ZC3H11AO75152 810 aaKnown RBP eCLIP18.32■□□□□ 0.52
CHTOP-203ENST00000368690 DDNO94850 711 aaPredicted RBP18.32■□□□□ 0.52
CHTOP-203ENST00000368690 ESRRAP11474 423 aaPredicted RBP18.32■□□□□ 0.52
CHTOP-203ENST00000368690 GPR162Q16538 588 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 RNASEH2BQ5TBB1 312 aaKnown RBP18.32■□□□□ 0.52
CHTOP-203ENST00000368690 BANPQ8N9N5 519 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 WDR60Q8WVS4 1066 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 DHX38Q92620 1227 aaKnown RBP18.32■□□□□ 0.52
CHTOP-203ENST00000368690 TSSK1BQ9BXA7 367 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
CHTOP-203ENST00000368690 GPRC5DQ9NZD1 345 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 DCTN4Q9UJW0 460 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 MYPNQ86TC9 1320 aa18.32■□□□□ 0.52
CHTOP-203ENST00000368690 TISP43B9A030 160 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 ADRB2P07550 413 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 LYNP07948 512 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 DHRS4L1P0CG22 281 aa18.31■□□□□ 0.52
CHTOP-203ENST00000368690 GSTT1P30711 240 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms