RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TAPT1Q6NXT6 567 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 TRMT1LQ7Z2T5 733 aaKnown RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 HAUS6Q7Z4H7 955 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 TRIM59Q8IWR1 403 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 C12orf56Q8IXR9 622 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 TC2NQ8N9U0 490 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 KCNN1Q92952 543 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 RELTQ969Z4 430 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 SMARCAD1Q9H4L7 1026 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 POLD4Q9HCU8 107 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 AGPAT3Q9NRZ7 376 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 DNAJB12Q9NXW2 375 aaKnown RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 MRPS23Q9Y3D9 190 aaKnown RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.47□□□□□ -0.89
TPM3-213ENST00000368545 PLD2O14939 933 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 ARHGAP6O43182 974 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 STX10O60499 249 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 TRIM21P19474 475 aaKnown RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 RFC2P35250 354 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 TFF2Q03403 129 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 PCSK9Q8NBP7 692 aaKnown RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 PPTC7Q8NI37 304 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 GPBAR1Q8TDU6 330 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 GLG1Q92896 1179 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 PLPPR2Q96GM1 343 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 JPH2Q9BR39 696 aaPredicted RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 ASPSCR1Q9BZE9 553 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 LACRTQ9GZZ8 138 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 KATNBL1Q9H079 304 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 GPRC5CQ9NQ84 441 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 KMT5AQ9NQR1 393 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 XPNPEP1Q9NQW7 623 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 ARHGEF4Q9NR80 690 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 KCND1Q9NSA2 647 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 SPTLC3Q9NUV7 552 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 ARMCX3Q9UH62 379 aaPredicted RBP9.47□□□□□ -0.89
TPM3-213ENST00000368545 FRMD4BQ9Y2L6 1034 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 SLC4A7Q9Y6M7 1214 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 DOCK3Q8IZD9 2030 aa9.47□□□□□ -0.89
TPM3-213ENST00000368545 A0A1W2PQJ5 194 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 CCDC169A6NNP5 214 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 CCP110O43303 1012 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 SNAI1O95863 264 aaPredicted RBP9.46□□□□□ -0.89
TPM3-213ENST00000368545 CASP14P31944 242 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 PSMC2P35998 433 aaKnown RBP9.46□□□□□ -0.89
TPM3-213ENST00000368545 NPTX2P47972 431 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 ADKP55263 362 aaKnown RBP9.46□□□□□ -0.89
TPM3-213ENST00000368545 ARHGAP1Q07960 439 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 NOLC1Q14978 699 aaKnown RBP eCLIP9.46□□□□□ -0.89
TPM3-213ENST00000368545 TARBP2Q15633 366 aaKnown RBP9.46□□□□□ -0.89
TPM3-213ENST00000368545 PTPN21Q16825 1174 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 LRFN4Q6PJG9 635 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 TRIM46Q7Z4K8 759 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 LRRTM3Q86VH5 581 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 TMEM161BQ8NDZ6 487 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 ATP8B4Q8TF62 1192 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 BAG1Q99933 345 aaPredicted RBP9.46□□□□□ -0.89
TPM3-213ENST00000368545 DHRS4Q9BTZ2 278 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 POLR3FQ9H1D9 316 aaPredicted RBP9.46□□□□□ -0.89
TPM3-213ENST00000368545 PDGFCQ9NRA1 345 aa9.46□□□□□ -0.89
TPM3-213ENST00000368545 SLC16A4O15374 487 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 AKAP3O75969 853 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 SCGB1D2O95969 90 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 SDHBP21912 280 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 CST5P28325 142 aaPredicted RBP9.46□□□□□ -0.9
TPM3-213ENST00000368545 NAMPTP43490 491 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 PRR20EP86478 221 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 PRR20CP86479 221 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 PRR20DP86480 221 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 PRR20BP86481 221 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 PRR20AP86496 221 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 SYCP1Q15431 976 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 DBN1Q16643 649 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 FNDC3BQ53EP0 1204 aaKnown RBP9.46□□□□□ -0.9
TPM3-213ENST00000368545 IQSEC1Q6DN90 963 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 CCSAPQ6IQ19 270 aaPredicted RBP9.46□□□□□ -0.9
TPM3-213ENST00000368545 NPLOC4Q8TAT6 608 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 ZFP42Q96MM3 310 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 ABHD10Q9NUJ1 306 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 DMAC2Q9NW81 257 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 ERAP1Q9NZ08 941 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 ARHGAP28Q9P2N2 729 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 CAPN11Q9UMQ6 739 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 TBX20Q9UMR3 447 aa9.46□□□□□ -0.9
TPM3-213ENST00000368545 LUC7L2Q9Y383 392 aaKnown RBP9.46□□□□□ -0.9
TPM3-213ENST00000368545 TCF20Q9UGU0 1960 aaKnown RBP9.45□□□□□ -0.9
TPM3-213ENST00000368545 A0A1W2PQU0 124 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 CLIC2O15247 247 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 MAPK13O15264 365 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 HBP1O60381 514 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 MAFO75444 373 aaPredicted RBP9.45□□□□□ -0.9
TPM3-213ENST00000368545 CABYRO75952 493 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 SLC7A5Q01650 507 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 ACVR2BQ13705 512 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 DUSP28Q4G0W2 176 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 ZNF365Q70YC5 407 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 TMEM139Q8IV31 216 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 FAM186BQ8IYM0 893 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms