RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 TRIM59Q8IWR1 403 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 TTC9BQ8N6N2 239 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 ATAD1Q8NBU5 361 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 DOCK6Q96HP0 2047 aa16.15■□□□□ 0.18
SMPDL3A-201ENST00000368440 CCL16O15467 120 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 STX10O60499 249 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 ATP2C2O75185 946 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 PAPLNO95428 1278 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 WARSP23381 471 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 MARSP56192 900 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 TCEAL8Q8IYN2 117 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 ADAMTS19Q8TE59 1207 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 SMG7Q92540 1137 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 CNOT6LQ96LI5 555 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 PKMYT1Q99640 499 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 PRKD2Q9BZL6 878 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 DACH1Q9UI36 760 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 GOLGA6L3A6NEY3 463 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 PRRG1O14668 218 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 TACC1O75410 805 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 ERCC5P28715 1186 aaPredicted RBP16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 ELF1P32519 619 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 ASPAP45381 313 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 LHX1P48742 406 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 FMO5P49326 533 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 PSMC1P62191 440 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 NOP14P78316 857 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 MYL7Q01449 175 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 DUSP4Q13115 394 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 INTS6LQ5JSJ4 861 aaKnown RBP16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 SASS6Q6UVJ0 657 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 FBXL13Q8NEE6 735 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 SPATA18Q8TC71 538 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 ACBD6Q9BR61 282 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 FAM50BQ9Y247 325 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 SLC27A5Q9Y2P5 690 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 INSL5Q9Y5Q6 135 aa16.14■□□□□ 0.17
SMPDL3A-201ENST00000368440 NOTCH4Q99466 2003 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 SOAT2O75908 522 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 GNA14O95837 355 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 PDGFRBP09619 1106 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 MTHFRP42898 656 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 ZNF445P59923 1031 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 UVSSAQ2YD98 709 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 HSP90AA4PQ58FG1 418 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 TAF4BQ92750 862 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 RIPOR3Q96MK2 946 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 LPIN3Q9BQK8 851 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 SYT15Q9BQS2 421 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 DPEP3Q9H4B8 488 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 HCFC1R1Q9NWW0 138 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 RAB20Q9NX57 234 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 GTF3C4Q9UKN8 822 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 COQ4Q9Y3A0 265 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 YIPF1Q9Y548 306 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 PTPRDP23468 1912 aa16.13■□□□□ 0.17
SMPDL3A-201ENST00000368440 MYBPHLA2RUH7 354 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 FGFR1OPO95684 399 aaKnown RBP16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 HNRNPA1P09651 372 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 SP100P23497 879 aaPredicted RBP16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 HOXA9P31269 272 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 NTHL1P78549 312 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 TSPY1Q01534 308 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 STX1AQ16623 288 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 TPD52L1Q16890 204 aaPredicted RBP16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 ATAT1Q5SQI0 421 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 OR6B3Q8NGW1 331 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 IMPG2Q9BZV3 1241 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 SNX25Q9H3E2 840 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 CRTAC1Q9NQ79 661 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 ABI2Q9NYB9 513 aaPredicted RBP16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 CCDC192P0DO97 292 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 PCSK1P29120 753 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 GNL1P36915 607 aaPredicted RBP16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 ZP2Q05996 745 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 TYRO3Q06418 890 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 TWF1Q12792 350 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 KCNH2Q12809 1159 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 LRSAM1Q6UWE0 723 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 GRASPQ7Z6J2 395 aaPredicted RBP16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 CREBRFQ8IUR6 639 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 DCP1BQ8IZD4 617 aaKnown RBP16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 BCO2Q9BYV7 579 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 RHOBTB2Q9BYZ6 727 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 DNAJC25Q9H1X3 360 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 PIDD1Q9HB75 910 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 ANO10Q9NW15 660 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 HMGXB4Q9UGU5 601 aa16.12■□□□□ 0.17
SMPDL3A-201ENST00000368440 LRG1P02750 347 aa16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 TATDN2Q93075 761 aa16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 NECTIN4Q96NY8 510 aa16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 PHF7Q9BWX1 381 aaPredicted RBP16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 NIF3L1Q9GZT8 377 aa16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 THAP9Q9H5L6 903 aa16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 CD320Q9NPF0 282 aa16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 SAMSN1Q9NSI8 373 aaKnown RBP16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 CDH9Q9ULB4 789 aa16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 MAFFQ9ULX9 164 aa16.11■□□□□ 0.17
SMPDL3A-201ENST00000368440 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms