RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 TRPM8Q7Z2W7 1104 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 TMEM192Q8IY95 271 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 ZCCHC9Q8N567 271 aaKnown RBP19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 INO80BQ9C086 356 aaPredicted RBP19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 CD248Q9HCU0 757 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 GPRC5DQ9NZD1 345 aa19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 CPSF3Q9UKF6 684 aaKnown RBP19.11■□□□□ 0.65
UBQLN4-201ENST00000368309 SSC5DA1L4H1 1573 aa19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 GOLGA8MH3BSY2 632 aa19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 HGSO14964 777 aaPredicted RBP19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 SH3D19Q5HYK7 790 aa19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 RIOX2Q8IUF8 465 aa19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 PAIP2Q9BPZ3 127 aaKnown RBP19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 POC1B-GALNT4F8VUJ3 575 aa19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 NOP56O00567 594 aaKnown RBP19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 EDNRBP24530 442 aa19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 ZBTB8OSQ8IWT0 167 aa19.1■□□□□ 0.65
UBQLN4-201ENST00000368309 RASA4BC9J798 803 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 RASA4O43374 803 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 HOXC6P09630 235 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 STX2P32856 288 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 AP3M2P53677 418 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 LACTBP83111 547 aaPredicted RBP19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 LMNB2Q03252 620 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 WDR72Q3MJ13 1102 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 NOL9Q5SY16 702 aaKnown RBP19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 EEF1DP3Q658K8 133 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 CYB5D1Q6P9G0 228 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 LCTP09848 1927 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 SGK1O00141 431 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 ABLIM1O14639 778 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 DNALI1O14645 258 aaPredicted RBP19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 TCEA3O75764 348 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 ITGBL1O95965 494 aaPredicted RBP19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 MTM1Q13496 603 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 ALLCQ8N6M5 410 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 P3H4Q92791 437 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 XYLT2Q9H1B5 865 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 hCG_1818297A0A087WSY0 165 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 EXOC1LA0A1B0GW35 172 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 ZBTB42B2RXF5 422 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 SPAG7O75391 227 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 BANF1O75531 89 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 LSM8O95777 96 aaKnown RBP19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 ASPAP45381 313 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 STAT4Q14765 748 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 EAPPQ56P03 285 aaPredicted RBP19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 TFDP3Q5H9I0 405 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 PPP1R2P3Q6NXS1 205 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 JOSD2Q8TAC2 188 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 COPS5Q92905 334 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 CYTH4Q9UIA0 394 aa19.09■□□□□ 0.65
UBQLN4-201ENST00000368309 GHRP10912 638 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 MCL1Q07820 350 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 PTPN20Q4JDL3 420 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 EMC1Q8N766 993 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 CKAP2Q8WWK9 683 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 PPP1R16BQ96T49 567 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.08■□□□□ 0.657e-8■■□□□ 11.6
UBQLN4-201ENST00000368309 TPX2Q9ULW0 747 aaKnown RBP19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 CEP83Q9Y592 693 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 PSMA2P25787 234 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 CDKN2BP42772 138 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 PIGHQ14442 188 aaPredicted RBP19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 PPP1R15BQ5SWA1 713 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 TGS1Q96RS0 853 aaKnown RBP19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 GPR20Q99678 358 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 AGTPBP1Q9UPW5 1226 aa19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 USP15Q9Y4E8 981 aaPredicted RBP19.08■□□□□ 0.65
UBQLN4-201ENST00000368309 TGFB3P10600 412 aa19.08■□□□□ 0.64
UBQLN4-201ENST00000368309 CLCN3P51790 818 aa19.08■□□□□ 0.64
UBQLN4-201ENST00000368309 MXD4Q14582 209 aaPredicted RBP19.08■□□□□ 0.64
UBQLN4-201ENST00000368309 FAM182AQ5T1J6 154 aa19.08■□□□□ 0.64
UBQLN4-201ENST00000368309 ZBED8Q8IZ13 594 aa19.08■□□□□ 0.64
UBQLN4-201ENST00000368309 KIAA0319LQ8IZA0 1049 aa19.08■□□□□ 0.64
UBQLN4-201ENST00000368309 MINDY3Q9H8M7 445 aa19.08■□□□□ 0.64
UBQLN4-201ENST00000368309 VPS37BQ9H9H4 285 aa19.08■□□□□ 0.64
UBQLN4-201ENST00000368309 NKIRAS1Q9NYS0 192 aa19.08■□□□□ 0.64
UBQLN4-201ENST00000368309 IRF6O14896 467 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 PIAS1O75925 651 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 CXCL8P10145 99 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 KRT3P12035 628 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 EIF4BP23588 611 aaKnown RBP19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 ATF7IP2Q5U623 682 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 LRRC38Q5VT99 294 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 KIF9Q9HAQ2 790 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 LGALS13Q9UHV8 139 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 IL1R2P27930 398 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 VCPP55072 806 aaKnown RBP19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 IRX3P78415 501 aaPredicted RBP19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 CDCA2Q69YH5 1023 aaPredicted RBP19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 ARFGAP1Q8N6T3 406 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 PCSK1NQ9UHG2 260 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 TNNC2P02585 160 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 GAD2Q05329 585 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 OASLQ15646 514 aaKnown RBP19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 WDR78Q5VTH9 848 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 RELL1Q8IUW5 271 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 ANKMY2Q8IV38 441 aa19.07■□□□□ 0.64
UBQLN4-201ENST00000368309 MAML1Q92585 1016 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms