RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NUP62CLQ9H1M0 184 aa24.05■■□□□ 1.44
ECHDC1-203ENST00000368291 SLC27A5Q9Y2P5 690 aa24.05■■□□□ 1.44
ECHDC1-203ENST00000368291 YIPF1Q9Y548 306 aa24.05■■□□□ 1.44
ECHDC1-203ENST00000368291 SLC16A3O15427 465 aaKnown RBP24.04■■□□□ 1.44
ECHDC1-203ENST00000368291 LRG1P02750 347 aa24.04■■□□□ 1.44
ECHDC1-203ENST00000368291 WARSP23381 471 aaKnown RBP24.04■■□□□ 1.44
ECHDC1-203ENST00000368291 LMO2P25791 158 aa24.04■■□□□ 1.44
ECHDC1-203ENST00000368291 CCDC142Q17RM4 750 aa24.04■■□□□ 1.44
ECHDC1-203ENST00000368291 ZNF699Q32M78 642 aa24.04■■□□□ 1.44
ECHDC1-203ENST00000368291 CEP72Q9P209 647 aa24.04■■□□□ 1.44
ECHDC1-203ENST00000368291 TACC1O75410 805 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 HLA-DRAP01903 254 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 STX17P56962 302 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 MYL7Q01449 175 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 TWF1Q12792 350 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 INTS6LQ5JSJ4 861 aaKnown RBP24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 TDRD5Q8NAT2 981 aaKnown RBP24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 TAS1R2Q8TE23 839 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 MED15Q96RN5 788 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 MYADMQ96S97 322 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 DNAJC25Q9H1X3 360 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 MMRN2Q9H8L6 949 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 TMEM8AQ9HCN3 771 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 HSFX1Q9UBD0 423 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 NXF1Q9UBU9 619 aaKnown RBP24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 GREB1Q4ZG55 1949 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 DENND4CQ5VZ89 1909 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 LRRN2O75325 713 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 SOAT2O75908 522 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 ASS1P00966 412 aaKnown RBP24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 FAM163BP0C2L3 166 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 GTF2H1P32780 548 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 TNNC1P63316 161 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 SMARCB1Q12824 385 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 PAK1Q13153 545 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 OTOP3Q7RTS5 596 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 FILIP1Q7Z7B0 1213 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 DCP1BQ8IZD4 617 aaKnown RBP24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 ZDHHC14Q8IZN3 488 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 CEP63Q96MT8 703 aa24.03■■□□□ 1.44
ECHDC1-203ENST00000368291 BICDL2A1A5D9 508 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 ATP2C2O75185 946 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 RHOP08100 348 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 PIK3CAP42336 1068 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 TSPY1Q01534 308 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 SGSM1Q2NKQ1 1148 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 ZNF667Q5HYK9 610 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 SPOPLQ6IQ16 392 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 FAM171BQ6P995 826 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 PI4K2AQ9BTU6 479 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 SDCBP2Q9H190 292 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 SMYD3Q9H7B4 428 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 GTF3C4Q9UKN8 822 aa24.02■■□□□ 1.44
ECHDC1-203ENST00000368291 MYBPHLA2RUH7 354 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 GOLGA6L22H0YM25 854 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 NRG2O14511 850 aaPredicted RBP24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 PTPN2P17706 415 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 FSHRP23945 695 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 PCSK1P29120 753 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 CDH8P55286 799 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 SLC5A9Q2M3M2 681 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 PABPC1LQ4VXU2 614 aaKnown RBP24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 GET4Q7L5D6 327 aaPredicted RBP24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 PLCD3Q8N3E9 789 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 ITFG1Q8TB96 612 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 SPPL2BQ8TCT7 592 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 C2orf15Q8WU43 125 aaKnown RBP24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 TAF4BQ92750 862 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 SYT15Q9BQS2 421 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 CRTAC1Q9NQ79 661 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 AVENQ9NQS1 362 aaPredicted RBP24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 ABI2Q9NYB9 513 aaPredicted RBP24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 MUTYHQ9UIF7 546 aa24.01■■□□□ 1.43
ECHDC1-203ENST00000368291 PI4K2BG5E9Z4 385 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 PDGFRBP09619 1106 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 HAPLN1P10915 354 aaPredicted RBP24■■□□□ 1.43
ECHDC1-203ENST00000368291 ATF6P18850 670 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 GBP2P32456 591 aaPredicted RBP24■■□□□ 1.43
ECHDC1-203ENST00000368291 KRT39Q6A163 491 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 POTEHQ6S545 545 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 HS6ST3Q8IZP7 471 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 SEMA4DQ92854 862 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 SLC35C1Q96A29 364 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 ACSF2Q96CM8 615 aaPredicted RBP24■■□□□ 1.43
ECHDC1-203ENST00000368291 CORO1BQ9BR76 489 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 EPHX3Q9H6B9 360 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 APOBEC3GQ9HC16 384 aaKnown RBP24■■□□□ 1.43
ECHDC1-203ENST00000368291 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24■■□□□ 1.43
ECHDC1-203ENST00000368291 ARMCX3Q9UH62 379 aaPredicted RBP24■■□□□ 1.43
ECHDC1-203ENST00000368291 CDH9Q9ULB4 789 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 PCDHB5Q9Y5E4 795 aa24■■□□□ 1.43
ECHDC1-203ENST00000368291 OBSL1O75147 1896 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 GNL1P36915 607 aaPredicted RBP23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 CCR2P41597 374 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 RAP1GAPP47736 663 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 PSMC1P62191 440 aaKnown RBP23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 NFE2Q16621 373 aaPredicted RBP23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 MGAT5BQ3V5L5 792 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 CBWD6Q4V339 395 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 DCAF17Q5H9S7 520 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms