RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 BTBD8Q5XKL5 378 aa13.88□□□□□ -0.19
PTPRK-204ENST00000368210 EXT2Q93063 718 aa13.88□□□□□ -0.19
PTPRK-204ENST00000368210 ARHGEF26Q96DR7 871 aa13.88□□□□□ -0.19
PTPRK-204ENST00000368210 TRIM62Q9BVG3 475 aa13.88□□□□□ -0.19
PTPRK-204ENST00000368210 ADAM33Q9BZ11 813 aa13.88□□□□□ -0.19
PTPRK-204ENST00000368210 DKK3Q9UBP4 350 aa13.88□□□□□ -0.19
PTPRK-204ENST00000368210 ZNF229Q9UJW7 825 aa13.88□□□□□ -0.19
PTPRK-204ENST00000368210 ANKRD26Q9UPS8 1709 aa13.88□□□□□ -0.19
PTPRK-204ENST00000368210 KITP10721 976 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 RBP3P10745 1247 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 KRT4P19013 534 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SESN2P58004 480 aaPredicted RBP13.87□□□□□ -0.19
PTPRK-204ENST00000368210 OCRLQ01968 901 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 OTOP1Q7RTM1 612 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 ZNF507Q8TCN5 953 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 EPAS1Q99814 870 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 DMGDHQ9UI17 866 aaKnown RBP13.87□□□□□ -0.19
PTPRK-204ENST00000368210 KIF1AQ12756 1690 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 BNIP3LO60238 219 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 RPS6KA5O75582 802 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SLITRK3O94933 977 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CSPG5O95196 566 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 ATP6V1G2O95670 118 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CD4P01730 458 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CYP2C9P11712 490 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CENPCQ03188 943 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 MAPK7Q13164 816 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SLC12A1Q13621 1099 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 C1orf131Q8NDD1 294 aaKnown RBP13.87□□□□□ -0.19
PTPRK-204ENST00000368210 MYCBPAPQ8TBZ2 947 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 TMC2Q8TDI7 906 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 TAS1R2Q8TE23 839 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 FAM161BQ96MY7 647 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 MTMR9Q96QG7 549 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
PTPRK-204ENST00000368210 MAGEB5Q9BZ81 275 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SMG5Q9UPR3 1016 aaKnown RBP13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.87□□□□□ -0.19
PTPRK-204ENST00000368210 ZC3H11AO75152 810 aaKnown RBP eCLIP13.87□□□□□ -0.19
PTPRK-204ENST00000368210 APOA1P02647 267 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 MLH1P40692 756 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 RARRES1P49788 294 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 BLVRAP53004 296 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 ITGA8P53708 1063 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SEC24CP53992 1094 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SMAD1Q15797 465 aaKnown RBP13.87□□□□□ -0.19
PTPRK-204ENST00000368210 ZCWPW2Q504Y3 356 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SYCP2LQ5T4T6 812 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SPATA18Q8TC71 538 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 MED15Q96RN5 788 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 KIAA1683Q9H0B3 1180 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 RSAD1Q9HA92 442 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 UBR1Q8IWV7 1749 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CCL15-CCL14A0A0B4J2E2 113 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CCDC195A0A1B0GUA6 201 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 GOLGA8RI6L899 631 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CASP2P42575 452 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 FNTAP49354 379 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 HDAC4P56524 1084 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CCL15Q16663 113 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 SMTNL2Q2TAL5 461 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CATSPER1Q8NEC5 780 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 KCNQ5Q9NR82 932 aa13.87□□□□□ -0.19
PTPRK-204ENST00000368210 CFAP69A5D8W1 941 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 ZBTB24O43167 697 aaPredicted RBP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 CHEK2O96017 543 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 BMP6P22004 513 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 HSD17B4P51659 736 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 NLRP11P59045 1033 aaKnown RBP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 TPI1P60174 286 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 DMPKQ09013 629 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 SLC29A2Q14542 456 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 RGS9BPQ6ZS82 235 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 USP33Q8TEY7 942 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 AFG1LQ8WV93 481 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 CASKIN2Q8WXE0 1202 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 POP1Q99575 1024 aaKnown RBP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 COQ7Q99807 217 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 KATNAL1Q9BW62 490 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 AIPL1Q9NZN9 384 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 IGF2BP3O00425 579 aaKnown RBP eCLIP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 SULT1E1P49888 294 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 FSCBQ5H9T9 825 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 KDM7AQ6ZMT4 941 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 IFT43Q96FT9 208 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 XPO6Q96QU8 1125 aaKnown RBP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 ROPN1BQ9BZX4 212 aaPredicted RBP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 ROPN1Q9HAT0 212 aaPredicted RBP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 OSGEPQ9NPF4 335 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 BTBD7Q9P203 1132 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 ZBBXA8MT70 800 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 VIL1P09327 827 aaKnown RBP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 HSD17B3P37058 310 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 PPARGP37231 505 aaPredicted RBP13.86□□□□□ -0.19
PTPRK-204ENST00000368210 MAGEA4P43358 317 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 CCNYL1Q8N7R7 359 aa13.86□□□□□ -0.19
PTPRK-204ENST00000368210 UBA3Q8TBC4 463 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms