RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 PCSK1P29120 753 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 EPHA5P54756 1037 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 INTS6LQ5JSJ4 861 aaKnown RBP25.66■■□□□ 1.7
PFDN2-201ENST00000368010 OSTM1Q86WC4 334 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 SMYD4Q8IYR2 804 aaPredicted RBP25.66■■□□□ 1.7
PFDN2-201ENST00000368010 HS6ST3Q8IZP7 471 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 SLC44A3Q8N4M1 653 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 MMS19Q96T76 1030 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 DNAJC25Q9H1X3 360 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 GDE1Q9NZC3 331 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 HCN4Q9Y3Q4 1203 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 ASB3Q9Y575 518 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 PCDHB5Q9Y5E4 795 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 PCDHA5Q9Y5H7 936 aa25.66■■□□□ 1.7
PFDN2-201ENST00000368010 MYO10Q9HD67 2058 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 SOAT2O75908 522 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 STAU1O95793 577 aaKnown RBP25.65■■□□□ 1.7
PFDN2-201ENST00000368010 ACAT1P24752 427 aaKnown RBP25.65■■□□□ 1.7
PFDN2-201ENST00000368010 ATICP31939 592 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 CDR1P51861 262 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 VEPH1Q14D04 833 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 ZNF658Q5TYW1 1059 aaPredicted RBP25.65■■□□□ 1.7
PFDN2-201ENST00000368010 PARM1Q6UWI2 310 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 LIMS2Q7Z4I7 341 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 ITIH5Q86UX2 942 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 ELOA2Q8IYF1 753 aaPredicted RBP25.65■■□□□ 1.7
PFDN2-201ENST00000368010 SPATA20Q8TB22 786 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 TMC2Q8TDI7 906 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 FGF14Q92915 247 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 SYAP1Q96A49 352 aaPredicted RBP25.65■■□□□ 1.7
PFDN2-201ENST00000368010 TCEAL4Q96EI5 215 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 MCRS1Q96EZ8 462 aa25.65■■□□□ 1.7
PFDN2-201ENST00000368010 MAPK13O15264 365 aa25.64■■□□□ 1.7
PFDN2-201ENST00000368010 GADD45BO75293 160 aaPredicted RBP25.64■■□□□ 1.7
PFDN2-201ENST00000368010 CCR2P41597 374 aa25.64■■□□□ 1.7
PFDN2-201ENST00000368010 MYL6P60660 151 aa25.64■■□□□ 1.7
PFDN2-201ENST00000368010 TNNC1P63316 161 aa25.64■■□□□ 1.7
PFDN2-201ENST00000368010 ZCWPW2Q504Y3 356 aa25.64■■□□□ 1.7
PFDN2-201ENST00000368010 TDRD10Q5VZ19 366 aaKnown RBP25.64■■□□□ 1.7
PFDN2-201ENST00000368010 SUGP1Q8IWZ8 645 aaKnown RBP25.64■■□□□ 1.7
PFDN2-201ENST00000368010 ST13P5Q8NFI4 369 aaPredicted RBP25.64■■□□□ 1.7
PFDN2-201ENST00000368010 FAM200AQ8TCP9 573 aa25.64■■□□□ 1.7
PFDN2-201ENST00000368010 KBTBD7Q8WVZ9 684 aa25.64■■□□□ 1.7
PFDN2-201ENST00000368010 ERCC4Q92889 916 aaPredicted RBP25.64■■□□□ 1.7
PFDN2-201ENST00000368010 PSMG2Q969U7 264 aa25.64■■□□□ 1.7
PFDN2-201ENST00000368010 GTPBP4Q9BZE4 634 aaKnown RBP25.64■■□□□ 1.7
PFDN2-201ENST00000368010 TMLHEQ9NVH6 421 aa25.64■■□□□ 1.7
PFDN2-201ENST00000368010 NOTCH4Q99466 2003 aa25.64■■□□□ 1.69
PFDN2-201ENST00000368010 NARSO43776 548 aaKnown RBP25.63■■□□□ 1.69
PFDN2-201ENST00000368010 AKAP3O75969 853 aa25.63■■□□□ 1.69
PFDN2-201ENST00000368010 HAPLN1P10915 354 aaPredicted RBP25.63■■□□□ 1.69
PFDN2-201ENST00000368010 SRFP11831 508 aa25.63■■□□□ 1.69
PFDN2-201ENST00000368010 WARSP23381 471 aaKnown RBP25.63■■□□□ 1.69
PFDN2-201ENST00000368010 DLG4P78352 724 aa25.63■■□□□ 1.69
PFDN2-201ENST00000368010 ADAM9Q13443 819 aa25.63■■□□□ 1.69
PFDN2-201ENST00000368010 EDRF1Q3B7T1 1238 aa25.63■■□□□ 1.69
PFDN2-201ENST00000368010 WDR72Q3MJ13 1102 aa25.63■■□□□ 1.69
PFDN2-201ENST00000368010 INTS8Q75QN2 995 aaKnown RBP25.63■■□□□ 1.69
PFDN2-201ENST00000368010 FBXL6Q8N531 539 aa25.63■■□□□ 1.69
PFDN2-201ENST00000368010 CLSTN1O94985 981 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 C4BPAP04003 597 aaKnown RBP25.62■■□□□ 1.69
PFDN2-201ENST00000368010 ATF6P18850 670 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 PSMC2P35998 433 aaKnown RBP25.62■■□□□ 1.69
PFDN2-201ENST00000368010 PRCPP42785 496 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 VAMP7P51809 220 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 NCOA4Q13772 614 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 COBLL1Q53SF7 1204 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 DNAJB7Q7Z6W7 309 aaPredicted RBP25.62■■□□□ 1.69
PFDN2-201ENST00000368010 TMC8Q8IU68 726 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 FAM186BQ8IYM0 893 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 PKMYT1Q99640 499 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 LRRC3Q9BY71 257 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 XYLT2Q9H1B5 865 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 ABCB6Q9NP58 842 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 RAPGEFL1Q9UHV5 662 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 GTF3C4Q9UKN8 822 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 FBXL21Q9UKT6 434 aa25.62■■□□□ 1.69
PFDN2-201ENST00000368010 IKBKBO14920 756 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 HCRTO43612 131 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 TACC1O75410 805 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 FAM163BP0C2L3 166 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 KRT13P13646 458 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 ZNF699Q32M78 642 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 ZACNQ401N2 412 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 LPIN3Q9BQK8 851 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 SYT15Q9BQS2 421 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 PI4K2AQ9BTU6 479 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 RPP25Q9BUL9 199 aaKnown RBP25.61■■□□□ 1.69
PFDN2-201ENST00000368010 SNX25Q9H3E2 840 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 VRTNQ9H8Y1 702 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 NXF1Q9UBU9 619 aaKnown RBP25.61■■□□□ 1.69
PFDN2-201ENST00000368010 CDH9Q9ULB4 789 aa25.61■■□□□ 1.69
PFDN2-201ENST00000368010 MOSPD3O75425 235 aa25.6■■□□□ 1.69
PFDN2-201ENST00000368010 CFHP08603 1231 aa25.6■■□□□ 1.69
PFDN2-201ENST00000368010 GJA1P17302 382 aa25.6■■□□□ 1.69
PFDN2-201ENST00000368010 ENPEPQ07075 957 aa25.6■■□□□ 1.69
PFDN2-201ENST00000368010 TAF12Q16514 161 aa25.6■■□□□ 1.69
PFDN2-201ENST00000368010 SPATA2LQ8IUW3 424 aaPredicted RBP25.6■■□□□ 1.69
PFDN2-201ENST00000368010 SHKBP1Q8TBC3 707 aa25.6■■□□□ 1.69
PFDN2-201ENST00000368010 TSG101Q99816 390 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms