RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 SLC4A11Q8NBS3 891 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 TRIM43Q96BQ3 446 aaPredicted RBP10.13□□□□□ -0.79
VTA1-201ENST00000367621 PGBD4Q96DM1 585 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 MRPL45Q9BRJ2 306 aaKnown RBP10.13□□□□□ -0.79
VTA1-201ENST00000367621 PAAF1Q9BRP4 392 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 FTHL17Q9BXU8 183 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 MCOLN1Q9GZU1 580 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 FAM124BQ9H5Z6 455 aaPredicted RBP10.13□□□□□ -0.79
VTA1-201ENST00000367621 UBN1Q9NPG3 1134 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 INTUQ9ULD6 942 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 ATP11BQ9Y2G3 1177 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 PAXBP1Q9Y5B6 917 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 ANK1P16157 1881 aa10.13□□□□□ -0.79
VTA1-201ENST00000367621 KPNA7A9QM74 516 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 ST8SIA5O15466 376 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 XPOTO43592 962 aaKnown RBP10.12□□□□□ -0.79
VTA1-201ENST00000367621 TACC1O75410 805 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 IPO7O95373 1038 aaKnown RBP10.12□□□□□ -0.79
VTA1-201ENST00000367621 PAEPP09466 180 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 CAPN2P17655 700 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 GNA15P30679 374 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 RPIAP49247 311 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 AARSP49588 968 aaKnown RBP eCLIP10.12□□□□□ -0.79
VTA1-201ENST00000367621 PDE6CP51160 858 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 GALCP54803 685 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 LILRA4P59901 499 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 MYO1EQ12965 1108 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 UPP1Q16831 310 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 ARHGAP29Q52LW3 1261 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 SYT10Q6XYQ8 523 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 VPS36Q86VN1 386 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 WDTC1Q8N5D0 677 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 RNF169Q8NCN4 708 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 C3orf58Q8NDZ4 430 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 KBTBD7Q8WVZ9 684 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 ZNF606Q8WXB4 792 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 SEPT8Q92599 483 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 ARHGEF26Q96DR7 871 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 PPP1R12CQ9BZL4 782 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 ELAC1Q9H777 363 aaKnown RBP10.12□□□□□ -0.79
VTA1-201ENST00000367621 PRDM10Q9NQV6 1147 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 SLC38A7Q9NVC3 462 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 BARX2Q9UMQ3 279 aaPredicted RBP10.12□□□□□ -0.79
VTA1-201ENST00000367621 GUCA1BQ9UMX6 200 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 L1RE1Q9UN81 338 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 SNX9Q9Y5X1 595 aa10.12□□□□□ -0.79
VTA1-201ENST00000367621 FAM170AA1A519 330 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 TMCO5BA8MYB1 307 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 KIF2AO00139 706 aaPredicted RBP10.11□□□□□ -0.79
VTA1-201ENST00000367621 PODXLO00592 558 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 KIAA0355O15063 1070 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 HCRTO43612 131 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 KRT86O43790 486 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 RTN2O75298 545 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 PARNO95453 639 aaKnown RBP10.11□□□□□ -0.79
VTA1-201ENST00000367621 AVPP01185 164 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 POMCP01189 267 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 FTLP02792 175 aaPredicted RBP10.11□□□□□ -0.79
VTA1-201ENST00000367621 TUBB4AP04350 444 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 CLTBP09497 229 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 H2AFZP0C0S5 128 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 TMEM253P0C7T8 217 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 P4HA1P13674 534 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 BRD2P25440 801 aaKnown RBP10.11□□□□□ -0.79
VTA1-201ENST00000367621 RPL9P32969 192 aaKnown RBP10.11□□□□□ -0.79
VTA1-201ENST00000367621 PNPLA4P41247 253 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 TAF6P49848 677 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 CLCNKBP51801 687 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 NDST1P52848 882 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 GNG11P61952 73 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 YWHAEP62258 255 aaKnown RBP10.11□□□□□ -0.79
VTA1-201ENST00000367621 TNNC1P63316 161 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 DSC1Q08554 894 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 KIF5AQ12840 1032 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 GRIK3Q13003 919 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 ORC1Q13415 861 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 TCEAL1Q15170 157 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 ZNF394Q53GI3 561 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 ACAD10Q6JQN1 1059 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 H2AFVQ71UI9 128 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 NECAB2Q7Z6G3 386 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 OSTM1Q86WC4 334 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 SLC35F6Q8N357 371 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 RABGGTAQ92696 567 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 APBB2Q92870 758 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 CYFIP2Q96F07 1278 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 CASD1Q96PB1 797 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 TSGA10Q9BZW7 698 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 TMEM39AQ9NV64 488 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 TMEM161AQ9NX61 479 aa10.11□□□□□ -0.79
VTA1-201ENST00000367621 NCANO14594 1321 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 A0A0A6YYK5 440 aaPredicted RBP10.1□□□□□ -0.79
VTA1-201ENST00000367621 MACROD2A1Z1Q3 448 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 ANKRD62A6NC57 917 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 CASTOR2A6NHX0 329 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 F8W810 466 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 THAP12O43422 761 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 KIF5CO60282 957 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 DDHD2O94830 711 aa10.1□□□□□ -0.79
VTA1-201ENST00000367621 MOCS3O95396 460 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms