RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 COL9A2Q14055 689 aaPredicted RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 GIT2Q14161 759 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 EPC2Q52LR7 807 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 RESP18Q5W5W9 173 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 EEF1DP3Q658K8 133 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ATL3Q6DD88 541 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 PKN3Q6P5Z2 889 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 LRRC55Q6ZSA7 311 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 FGD2Q7Z6J4 655 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 SFR1Q86XK3 245 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 FAM178BQ8IXR5 827 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 GRAMD1CQ8IYS0 662 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ABI1Q8IZP0 508 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 FIBCD1Q8N539 461 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 MYCT1Q8N699 235 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CEP120Q8N960 986 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 SMG8Q8ND04 991 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 TMEM161BQ8NDZ6 487 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 GATAD2BQ8WXI9 593 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 PPM1EQ8WY54 764 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 SECISBP2LQ93073 1101 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 HPS3Q969F9 1004 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 FERD3LQ96RJ6 166 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 TGS1Q96RS0 853 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 FIZ1Q96SL8 496 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 KLF16Q9BXK1 252 aaPredicted RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 FGFBP2Q9BYJ0 223 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 GBP3Q9H0R5 595 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CXCL16Q9H2A7 254 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 IKZF4Q9H2S9 585 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 FZD8Q9H461 694 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 PDZD7Q9H5P4 517 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 PARVGQ9HBI0 331 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ALG13Q9NP73 1137 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CRTAC1Q9NQ79 661 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ARHGEF4Q9NR80 690 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 PRMT7Q9NVM4 692 aaPredicted RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 GEMIN8Q9NWZ8 242 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 KCND2Q9NZV8 630 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ANKFY1Q9P2R3 1169 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CACNG4Q9UBN1 327 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 RCOR1Q9UKL0 485 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CDV3Q9UKY7 258 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ODF2LQ9ULJ1 636 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 IPPQ9Y573 584 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 OBSL1O75147 1896 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 DENND4AQ7Z401 1863 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 GREB1Q4ZG55 1949 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 NT5C1B-RDH14C9J2C7 533 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 MEN1O00255 615 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ACKR2O00590 384 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 HNRNPDLO14979 420 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 SLC26A4O43511 780 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ZC3H11AO75152 810 aaKnown RBP eCLIP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CILPO75339 1184 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 POMCP01189 267 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 MAPTP10636 758 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 HARSP12081 509 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 PFKFB1P16118 471 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CES1P23141 567 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 NMT1P30419 496 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 AXLP30530 894 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 AFMP43652 599 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CASP5P51878 434 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 NDUFA8P51970 172 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ZNF131P52739 623 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 EFNA5P52803 228 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 NCKAP1LP55160 1127 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 OSTNP61366 133 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ERVK-21P61565 698 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 FAM189BP81408 668 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 RELBQ01201 579 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ITKQ08881 620 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 SETDB1Q15047 1291 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 FAM187BQ17R55 369 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ZNF568Q3ZCX4 644 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ZC2HC1CQ53FD0 456 aaPredicted RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 GLRA4Q5JXX5 417 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 SPOUT1Q5T280 376 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 NT5DC1Q5TFE4 455 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ATF7IP2Q5U623 682 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ADALQ6DHV7 355 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 PPP4R4Q6NUP7 873 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 SLC27A1Q6PCB7 646 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 SV2BQ7L1I2 683 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 HAUS6Q7Z4H7 955 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 TMEM173Q86WV6 379 aaPredicted RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 TMEM192Q8IY95 271 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CMTR2Q8IYT2 770 aaKnown RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 LRRC43Q8N309 656 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CBARPQ8N350 705 aaPredicted RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 VPS37AQ8NEZ2 397 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 PARD3BQ8TEW8 1205 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 USP33Q8TEY7 942 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 KLHL6Q8WZ60 621 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 E2F7Q96AV8 911 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 DNAJC19Q96DA6 116 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 ZBTB45Q96K62 511 aaPredicted RBP3.42□□□□□ -1.86
PTPRC-203ENST00000367367 CASD1Q96PB1 797 aa3.42□□□□□ -1.86
PTPRC-203ENST00000367367 GAD1Q99259 594 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms