RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 IFT43Q96FT9 208 aa12□□□□□ -0.49
RD3-201ENST00000367002 GDF3Q9NR23 364 aa12□□□□□ -0.49
RD3-201ENST00000367002 LRFN2Q9ULH4 789 aa12□□□□□ -0.49
RD3-201ENST00000367002 NAALADL1Q9UQQ1 740 aa12□□□□□ -0.49
RD3-201ENST00000367002 OGTO15294 1046 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 KIF1CO43896 1103 aaKnown RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 ZC3H11AO75152 810 aaKnown RBP eCLIP11.99□□□□□ -0.49
RD3-201ENST00000367002 OTUD4Q01804 1114 aaKnown RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 CHI3L2Q15782 390 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 CNGA3Q16281 694 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 TEDDM1Q5T9Z0 273 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 TMEM139Q8IV31 216 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 GIPC2Q8TF65 315 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 FAM163AQ96GL9 167 aaPredicted RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 HPDLQ96IR7 371 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 RMDN2Q96LZ7 410 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 TRIM15Q9C019 465 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 MTMR12Q9C0I1 747 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 KIF20BQ96Q89 1820 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 E2F6O75461 281 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 ANP32DO95626 131 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 SYF2O95926 243 aaKnown RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 RARAP10276 462 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 RPL21P46778 160 aaKnown RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 CASP5P51878 434 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 USP10Q14694 798 aaKnown RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 EFCAB12Q6NXP0 572 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 IRF2BP1Q8IU81 584 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 ACTL9Q8TC94 416 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 SARS2Q9NP81 518 aaKnown RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 PRMT7Q9NVM4 692 aaPredicted RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 AIM2O14862 343 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 DNAJC8O75937 253 aaPredicted RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 PYGBP11216 843 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 SPRP35270 261 aaPredicted RBP11.99□□□□□ -0.49
RD3-201ENST00000367002 SULT1E1P49888 294 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 EVX2Q03828 476 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 ARHGAP18Q8N392 663 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 FBXO36Q8NEA4 188 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 EXD1Q8NHP7 514 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 ELMO3Q96BJ8 720 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 OLFM3Q96PB7 478 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 KCNK16Q96T55 309 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 ZBTB18Q99592 522 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 ABCF3Q9NUQ8 709 aa11.99□□□□□ -0.49
RD3-201ENST00000367002 UBA6A0AVT1 1052 aaPredicted RBP11.98□□□□□ -0.49
RD3-201ENST00000367002 DFFAO00273 331 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 MAGEB2O15479 319 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 SNX2O60749 519 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 KLHL2O95198 593 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 ITGB3P05106 788 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 EEF1DP29692 281 aaKnown RBP11.98□□□□□ -0.49
RD3-201ENST00000367002 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
RD3-201ENST00000367002 ORC1Q13415 861 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 DCAF6Q58WW2 860 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 TMEM154Q6P9G4 183 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 C4orf19Q8IY42 314 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 MAGEB18Q96M61 343 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 PDCD2LQ9BRP1 358 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 SHCBP1LQ9BZQ2 653 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 DLGAP2Q9P1A6 1054 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 BCL9O00512 1426 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 CES2O00748 559 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 RIPK2O43353 540 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 MCF2P10911 925 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 KCNA3P22001 575 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 SOX10P56693 466 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 SKOR1P84550 965 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 TMEM62Q0P6H9 643 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 FUT2Q10981 343 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 CBWD6Q4V339 395 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 CBWD3Q5JTY5 395 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 CBWD5Q5RIA9 395 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 ANGEL2Q5VTE6 544 aaKnown RBP11.98□□□□□ -0.49
RD3-201ENST00000367002 SAMD7Q7Z3H4 446 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 PRPF39Q86UA1 669 aaKnown RBP11.98□□□□□ -0.49
RD3-201ENST00000367002 HAS1Q92839 578 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 DNAJC19Q96DA6 116 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 MED15Q96RN5 788 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 FRMD8Q9BZ67 464 aaPredicted RBP11.98□□□□□ -0.49
RD3-201ENST00000367002 KDM4CQ9H3R0 1056 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 LRRC4BQ9NT99 713 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 REXO2Q9Y3B8 237 aaKnown RBP11.98□□□□□ -0.49
RD3-201ENST00000367002 TNS2Q63HR2 1409 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 ARHGAP10A1A4S6 786 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 ADCY3O60266 1144 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 IL18RAPO95256 599 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 AMPD2Q01433 879 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 CYP24A1Q07973 514 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 CYTH1Q15438 398 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 GRIK5Q16478 980 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 COBLL1Q53SF7 1204 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 TTC39BQ5VTQ0 682 aaPredicted RBP11.98□□□□□ -0.49
RD3-201ENST00000367002 BTBD8Q5XKL5 378 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 GMCL1P1Q8NEA9 526 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 USP33Q8TEY7 942 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 BAP1Q92560 729 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 CMTM5Q96DZ9 223 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 TASP1Q9H6P5 420 aa11.98□□□□□ -0.49
RD3-201ENST00000367002 CACYBPQ9HB71 228 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms