RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 WDR72Q3MJ13 1102 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 LIN9Q5TKA1 542 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 SLC8B1Q6J4K2 584 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 CAVIN1Q6NZI2 390 aaKnown RBP16.56■□□□□ 0.24
PRKN-203ENST00000366894 CREBRFQ8IUR6 639 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 KREMEN2Q8NCW0 462 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 C2orf15Q8WU43 125 aaKnown RBP16.56■□□□□ 0.24
PRKN-203ENST00000366894 ZNF707Q96C28 371 aaPredicted RBP16.56■□□□□ 0.24
PRKN-203ENST00000366894 RPGRIP1Q96KN7 1286 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 FAM81BQ96LP2 452 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 IRF2BPLQ9H1B7 796 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 FBXW11Q9UKB1 542 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.56■□□□□ 0.24
PRKN-203ENST00000366894 C2orf16Q68DN1 1984 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 DENND4AQ7Z401 1863 aa16.56■□□□□ 0.24
PRKN-203ENST00000366894 CACNA1HO95180 2353 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 TRIM49BA6NDI0 452 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 SMTNL1A8MU46 457 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 CST3P01034 146 aaPredicted RBP16.55■□□□□ 0.24
PRKN-203ENST00000366894 MTHFRP42898 656 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 PMS1P54277 932 aaKnown RBP16.55■□□□□ 0.24
PRKN-203ENST00000366894 STX17P56962 302 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 ZNF699Q32M78 642 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 DCAF17Q5H9S7 520 aaPredicted RBP16.55■□□□□ 0.24
PRKN-203ENST00000366894 LMBRD2Q68DH5 695 aaPredicted RBP16.55■□□□□ 0.24
PRKN-203ENST00000366894 FBXL13Q8NEE6 735 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 ENOX1Q8TC92 643 aaKnown RBP16.55■□□□□ 0.24
PRKN-203ENST00000366894 ZNF516Q92618 1163 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 BORCS6Q96GS4 357 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 RIPOR3Q96MK2 946 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 NECTIN4Q96NY8 510 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 DUSP9Q99956 384 aaKnown RBP16.55■□□□□ 0.24
PRKN-203ENST00000366894 ACBD6Q9BR61 282 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 SNX25Q9H3E2 840 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 HSFX1Q9UBD0 423 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 SIX4Q9UIU6 781 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 CDY1Q9Y6F8 540 aa16.55■□□□□ 0.24
PRKN-203ENST00000366894 CCDC195A0A1B0GUA6 201 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 SPTLC1O15269 473 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 TACC1O75410 805 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 PIK3CAP42336 1068 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 GCLMP48507 274 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 MXI1P50539 228 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 NFE2Q16621 373 aaPredicted RBP16.54■□□□□ 0.24
PRKN-203ENST00000366894 ATAT1Q5SQI0 421 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 SCARA3Q6AZY7 606 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 C15orf39Q6ZRI6 1047 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 FAM84AQ96KN4 292 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 RHOBTB2Q9BYZ6 727 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 FAM86C1Q9NVL1 165 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 RAB20Q9NX57 234 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 ZDHHC7Q9NXF8 308 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 FBXL5Q9UKA1 691 aa16.54■□□□□ 0.24
PRKN-203ENST00000366894 ZFHX2Q9C0A1 2572 aaPredicted RBP16.54■□□□□ 0.24
PRKN-203ENST00000366894 XYLBO75191 536 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 ZMYND10O75800 440 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 HNRNPA1P09651 372 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRKN-203ENST00000366894 CPB1P15086 417 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 ATF2P15336 505 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 SP100P23497 879 aaPredicted RBP16.53■□□□□ 0.24
PRKN-203ENST00000366894 GNL1P36915 607 aaPredicted RBP16.53■□□□□ 0.24
PRKN-203ENST00000366894 TUFMP49411 452 aaKnown RBP16.53■□□□□ 0.24
PRKN-203ENST00000366894 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
PRKN-203ENST00000366894 MYL6P60660 151 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 YWHAEP62258 255 aaKnown RBP16.53■□□□□ 0.24
PRKN-203ENST00000366894 TPM4P67936 248 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 DLG4P78352 724 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 GPR17Q13304 367 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 PLD1Q13393 1074 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 DPCR1Q3MIW9 517 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
PRKN-203ENST00000366894 SMYD5Q6GMV2 418 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 ELMOD1Q8N336 334 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 CXorf38Q8TB03 319 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 ATOH1Q92858 354 aaPredicted RBP16.53■□□□□ 0.24
PRKN-203ENST00000366894 ASIC4Q96FT7 647 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 EEF2KMTQ96G04 330 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 CYP3A43Q9HB55 503 aa16.53■□□□□ 0.24
PRKN-203ENST00000366894 NXF1Q9UBU9 619 aaKnown RBP16.53■□□□□ 0.24
PRKN-203ENST00000366894 AFF4Q9UHB7 1163 aaKnown RBP16.53■□□□□ 0.24
PRKN-203ENST00000366894 SCN1AP35498 2009 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 C2CD4DB7Z1M9 353 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 PRRG1O14668 218 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 ABLIM3O94929 683 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 AFPP02771 609 aaKnown RBP16.52■□□□□ 0.24
PRKN-203ENST00000366894 CDK11BP21127 795 aaKnown RBP16.52■□□□□ 0.24
PRKN-203ENST00000366894 EEF1GP26641 437 aaKnown RBP16.52■□□□□ 0.24
PRKN-203ENST00000366894 HOXA9P31269 272 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 MTIF2P46199 727 aaKnown RBP16.52■□□□□ 0.24
PRKN-203ENST00000366894 ROR1Q01973 937 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 PTPN21Q16825 1174 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 WSCD1Q658N2 575 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 ADGRF2Q8IZF7 708 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 TNIP3Q96KP6 325 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 TMEM63CQ9P1W3 806 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 CDH9Q9ULB4 789 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 COQ4Q9Y3A0 265 aa16.52■□□□□ 0.24
PRKN-203ENST00000366894 TIMM13Q9Y5L4 95 aaPredicted RBP16.52■□□□□ 0.24
PRKN-203ENST00000366894 PTPRJQ12913 1337 aa16.51■□□□□ 0.23
PRKN-203ENST00000366894 WDR27A2RRH5 827 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms