RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 SOX1O00570 391 aaPredicted RBP11.56□□□□□ -0.56
H3F3A-202ENST00000366814 POLR3GO15318 223 aaPredicted RBP11.56□□□□□ -0.56
H3F3A-202ENST00000366814 CST3P01034 146 aaPredicted RBP11.56□□□□□ -0.56
H3F3A-202ENST00000366814 CALB1P05937 261 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 KRT19P08727 400 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 CXCL8P10145 99 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 ATICP31939 592 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 ZNF132P52740 706 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 NOMO3P69849 1222 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 MRPS25P82663 173 aaKnown RBP11.56□□□□□ -0.56
H3F3A-202ENST00000366814 LRIT3Q3SXY7 679 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 MFSD5Q6N075 450 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 NT5DC4Q86YG4 428 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 PHF13Q86YI8 300 aaPredicted RBP11.56□□□□□ -0.56
H3F3A-202ENST00000366814 TMEM199Q8N511 208 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.56□□□□□ -0.56
H3F3A-202ENST00000366814 MAIP1Q8WWC4 291 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 ZBTB10Q96DT7 871 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 CYFIP2Q96F07 1278 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 LRCH3Q96II8 777 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 ZNF518BQ9C0D4 1074 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 CISHQ9NSE2 258 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.56□□□□□ -0.56
H3F3A-202ENST00000366814 UMODL1Q5DID0 1318 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 NRCAMQ92823 1304 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 ANK1P16157 1881 aa11.56□□□□□ -0.56
H3F3A-202ENST00000366814 RANBP2P49792 3224 aaKnown RBP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 MED7O43513 233 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 HSF2BPO75031 334 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 CD58P19256 250 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 CYP2C18P33260 490 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 AARSP49588 968 aaKnown RBP eCLIP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 DHX34Q14147 1143 aaKnown RBP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 HLTFQ14527 1009 aaKnown RBP eCLIP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 PCBP1Q15365 356 aaKnown RBP eCLIP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 DCAF4L1Q3SXM0 396 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 C9orf50Q5SZB4 431 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 DCAF12L1Q5VU92 463 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 MON1BQ7L1V2 547 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 CDR2LQ86X02 465 aaPredicted RBP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 CD302Q8IX05 232 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 EFCAB13Q8IY85 973 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 UBR7Q8N806 425 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 TMEM35BQ8NCS4 154 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 ZNF606Q8WXB4 792 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 PPP1R16BQ96T49 567 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 HINFPQ9BQA5 517 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 HIPK3Q9H422 1215 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 PDZD7Q9H5P4 517 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 SLC24A3Q9HC58 644 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 FAM114A2Q9NRY5 505 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 TRMT13Q9NUP7 481 aaKnown RBP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 PARVAQ9NVD7 372 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 NFU1Q9UMS0 254 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 TRIP12Q14669 1992 aaPredicted RBP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 IQCF3P0C7M6 154 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 ARF4P18085 180 aaPredicted RBP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 RRM1P23921 792 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 CHRNA3P32297 505 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 ZNF211Q13398 564 aaPredicted RBP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 PPIGQ13427 754 aaKnown RBP eCLIP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 AMHR2Q16671 573 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 ALS2CLQ60I27 953 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 PASD1Q8IV76 773 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 TTC39CQ8N584 583 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 CEP120Q8N960 986 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 ALG3Q92685 438 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 CD101Q93033 1021 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 CPB2Q96IY4 423 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 GDAP1L1Q96MZ0 367 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 ACAP3Q96P50 834 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 C11orf70Q9BRQ4 267 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 GCOM2Q9BZD3 368 aaPredicted RBP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 CHORDC1Q9UHD1 332 aaPredicted RBP11.55□□□□□ -0.56
H3F3A-202ENST00000366814 AMACRQ9UHK6 382 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
H3F3A-202ENST00000366814 FAM187AA6NFU0 413 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 LACTBL1A8MY62 500 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 OPA1O60313 960 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 TSPAN1O60635 241 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 PHF2O75151 1096 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 CALCAP01258 141 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 CYP2C9P11712 490 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 CSF2RAP15509 400 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 CETN2P41208 172 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 CARSP49589 748 aaKnown RBP11.54□□□□□ -0.56
H3F3A-202ENST00000366814 PEX5P50542 639 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 CCL23P55773 120 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 TAP1Q03518 808 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 PTPN11Q06124 597 aaPredicted RBP11.54□□□□□ -0.56
H3F3A-202ENST00000366814 TMEM132DQ14C87 1099 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 TERF2Q15554 542 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 JADE1Q6IE81 842 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 POTEHQ6S545 545 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 SCARA5Q6ZMJ2 495 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 C7orf31Q8N865 590 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 CASKIN2Q8WXE0 1202 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 KRT35Q92764 455 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 KAT2BQ92831 832 aa11.54□□□□□ -0.56
H3F3A-202ENST00000366814 BTBD6Q96KE9 485 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms