RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 LOC100653049A0A140TA62 436 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 KRT34O76011 436 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 ZNF280DQ6N043 979 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 ZBTB8BQ8NAP8 495 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 OXER1Q8TDS5 423 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 ATP8B4Q8TF62 1192 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 AGPAT5Q9NUQ2 364 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 FAM32AQ9Y421 112 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 MYL3P08590 195 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 DHX34Q14147 1143 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 ADSSL1Q8N142 457 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 GPBP1L1Q9HC44 474 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 C12orf4Q9NQ89 552 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 STX7O15400 261 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 ARSEP51690 589 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 PTK7Q13308 1070 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 SLC29A2Q14542 456 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 DDX53Q86TM3 631 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 SAPCD2Q86UD0 394 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 CLEC4FQ8N1N0 589 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 C10orf53Q8N6V4 93 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 FOXP1Q9H334 677 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 SP110Q9HB58 689 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 ANGPT2O15123 496 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 PSMC2P35998 433 aaKnown RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 RTP1P59025 263 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 CACNB2Q08289 660 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 FANCBQ8NB91 859 aa11.53□□□□□ -0.56
CDC42BPA-205ENST00000366769 RBM47A0AV96 593 aaKnown RBP11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 CLRN2A0PK11 232 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 PEX1O43933 1283 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 EGFLAMQ63HQ2 1017 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 AFDNP55196 1824 aaKnown RBP11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 CCND2P30279 289 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 SSTR3P32745 418 aaPredicted RBP11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 PPP3CCP48454 512 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 KCTD1Q719H9 257 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 PTF1AQ7RTS3 328 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 DMGDHQ9UI17 866 aaKnown RBP11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 TAF5Q15542 800 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 LDLRAP1Q5SW96 308 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 CDYLQ9Y232 598 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 CHKBQ9Y259 395 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 MYRFQ9Y2G1 1151 aa11.52□□□□□ -0.56
CDC42BPA-205ENST00000366769 USP38Q8NB14 1042 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 CEP170P1Q96L14 293 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 MBD2Q9UBB5 411 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 STK17AQ9UEE5 414 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 C15orf38-AP3S2A0A0A6YYH1 394 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 CLDN3O15551 220 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 IFI35P80217 286 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 RASA2Q15283 850 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 FAM98CQ17RN3 349 aaKnown RBP11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 ARPINQ7Z6K5 226 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 DYRK4Q9NR20 520 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 ANAPC7Q9UJX3 599 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 EPB42P16452 691 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 SPIDRQ14159 915 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 SHC4Q6S5L8 630 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 CYP4V2Q6ZWL3 525 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 GALNT15Q8N3T1 639 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 C1orf50Q9BV19 199 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 ITGA8P53708 1063 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 CCNA1P78396 465 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 COBLL1Q53SF7 1204 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 UCMAQ8WVF2 138 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 B3GALT6Q96L58 329 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 NNMTP40261 264 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 TUBA3EQ6PEY2 450 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 VN1R5Q7Z5H4 357 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 ROGDIQ9GZN7 287 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 DGKBQ9Y6T7 804 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 OSBPP22059 807 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 ERVK-24P63145 666 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 TRIM71Q2Q1W2 868 aaKnown RBP11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 FAM83BQ5T0W9 1011 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 AMIGO2Q86SJ2 522 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 DEFB107AQ8IZN7 70 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 OR6Y1Q8NGX8 325 aa11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.57
CDC42BPA-205ENST00000366769 PEX14O75381 377 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 SRP72O76094 671 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 ARMCX2Q7L311 632 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF564Q8TBZ8 553 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 PLCL2Q9UPR0 1127 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 ASMTLO95671 621 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 NCALDP61601 193 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 PRKCQQ04759 706 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 FAM111AQ96PZ2 611 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 STAP2Q9UGK3 403 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF518AQ6AHZ1 1483 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 LAYNQ6UX15 382 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 COL23A1Q86Y22 540 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 TATDN2Q93075 761 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 BTBD10Q9BSF8 475 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 MAP10Q9P2G4 905 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 265.9 ms