RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 NEDD4P46934 1319 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 FRMPD3Q5JV73 1810 aa8.98□□□□□ -0.97
YBX3-204ENST00000366290 SMCHD1A6NHR9 2005 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 ZNF213O14771 459 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 EPB41L2O43491 1005 aaKnown RBP8.97□□□□□ -0.97
YBX3-204ENST00000366290 REC8O95072 547 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 C8BP07358 591 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 TOP1P11387 765 aaKnown RBP8.97□□□□□ -0.97
YBX3-204ENST00000366290 FCER1AP12319 257 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 HSPA4P34932 840 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 SLC1A4P43007 532 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 ERVK-21P61565 698 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 CCL14Q16627 93 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 MLANAQ16655 118 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 IMMTQ16891 758 aaKnown RBP8.97□□□□□ -0.97
YBX3-204ENST00000366290 BTNL9Q6UXG8 535 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 HIPK4Q8NE63 616 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 ANKS1AQ92625 1134 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 ESR2Q92731 530 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 DEFB118Q96PH6 123 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 ZDHHC5Q9C0B5 715 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.97□□□□□ -0.97
YBX3-204ENST00000366290 TOPORSQ9NS56 1045 aaPredicted RBP8.97□□□□□ -0.97
YBX3-204ENST00000366290 FLRT1Q9NZU1 646 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 ARHGAP28Q9P2N2 729 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 MBD1Q9UIS9 605 aaPredicted RBP8.97□□□□□ -0.97
YBX3-204ENST00000366290 OGDHLQ9ULD0 1010 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 STX8Q9UNK0 236 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 ASB1Q9Y576 335 aa8.97□□□□□ -0.97
YBX3-204ENST00000366290 DNAH12Q6ZR08 3092 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 LCHNA4D1U4 455 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 E7EWF7 191 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 GABRDO14764 452 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 ZBED4O75132 1171 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 SNHG28P0DPA3 235 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 MC4RP32245 332 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 MC3RP41968 323 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 CDR1P51861 262 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 STAT2P52630 851 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 NCKAP1LP55160 1127 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 ADCY1Q08828 1119 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 PLS1Q14651 629 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 TARBP2Q15633 366 aaKnown RBP8.96□□□□□ -0.98
YBX3-204ENST00000366290 CCDC178Q5BJE1 867 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 RTN4RL1Q86UN2 441 aaPredicted RBP8.96□□□□□ -0.98
YBX3-204ENST00000366290 FAM160B2Q86V87 743 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 PROSER1Q86XN7 944 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 DGKHQ86XP1 1220 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 CHURC1Q8WUH1 139 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 FOXRED1Q96CU9 486 aaPredicted RBP8.96□□□□□ -0.98
YBX3-204ENST00000366290 TMEM47Q9BQJ4 181 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 C14orf119Q9NWQ9 140 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 NRBP1Q9UHY1 535 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 MSRAQ9UJ68 235 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 G3BP2Q9UN86 482 aaKnown RBP8.96□□□□□ -0.98
YBX3-204ENST00000366290 PCDHA5Q9Y5H7 936 aa8.96□□□□□ -0.98
YBX3-204ENST00000366290 TEX51A0A1B0GUA7 166 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 LRRC10BA6NIK2 292 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 TMEM232C9JQI7 657 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 GOLGA6L22H0YM25 854 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 KDM1AO60341 852 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 FARP2O94887 1054 aaPredicted RBP8.95□□□□□ -0.98
YBX3-204ENST00000366290 PDHBP11177 359 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 CYBAP13498 195 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 MCCP23508 829 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 THBS2P35442 1172 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 MESP2Q0VG99 397 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 ADCK5Q3MIX3 580 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 MFSD14CQ5VZR4 134 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 VASNQ6EMK4 673 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 LIPIQ6XZB0 460 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 FRMD7Q6ZUT3 714 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 CYB5R4Q7L1T6 521 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 DPP9Q86TI2 863 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 CILP2Q8IUL8 1156 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 MB21D2Q8IYB1 491 aaPredicted RBP8.95□□□□□ -0.98
YBX3-204ENST00000366290 MSL3Q8N5Y2 521 aaKnown RBP8.95□□□□□ -0.98
YBX3-204ENST00000366290 CHST13Q8NET6 341 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 MAML3Q96JK9 1138 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 KRT23Q9C075 422 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 SLC39A2Q9NP94 309 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 USP36Q9P275 1121 aaKnown RBP8.95□□□□□ -0.98
YBX3-204ENST00000366290 WASF3Q9UPY6 502 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 RIPK3Q9Y572 518 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 SNX14Q9Y5W7 946 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 ZNF536O15090 1300 aa8.95□□□□□ -0.98
YBX3-204ENST00000366290 MCM3APO60318 1980 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 UBA6A0AVT1 1052 aaPredicted RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 ZNF839A8K0R7 811 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 TFRCP02786 760 aaKnown RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 ENO2P09104 434 aaPredicted RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 ATF2P15336 505 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 PTGS1P23219 599 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 CCND3P30281 292 aaPredicted RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 ANTXR2P58335 489 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 KCTD2Q14681 263 aa8.94□□□□□ -0.98
YBX3-204ENST00000366290 RRP12Q5JTH9 1297 aaKnown RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 SNRNP48Q6IEG0 339 aaKnown RBP8.94□□□□□ -0.98
YBX3-204ENST00000366290 MAMDC4Q6UXC1 1216 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms