RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 LSAMPQ13449 338 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 ZBTB46Q86UZ6 589 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 CTAGE3PQ8IX95 158 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 GRK7Q8WTQ7 553 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 OSBPL8Q9BZF1 889 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 DOLKQ9UPQ8 538 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 NCANO14594 1321 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 UMODL1Q5DID0 1318 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 C2CD2LO14523 706 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 FAM163BP0C2L3 166 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 KRT10P13645 584 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 SSTR1P30872 391 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 CCR3P51677 355 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 ARL4CP56559 192 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 PRPF39Q86UA1 669 aaKnown RBP13.35□□□□□ -0.27
VAMP1-201ENST00000361716 PPP2R3CQ969Q6 453 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 C11orf70Q9BRQ4 267 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 KLHL4Q9C0H6 718 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 ANLNQ9NQW6 1124 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 PCDHGA4Q9Y5G9 962 aa13.35□□□□□ -0.27
VAMP1-201ENST00000361716 CLRN2A0PK11 232 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 SPECC1L-ADORA2AF8WAN1 911 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 ATP2A1O14983 1001 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 SERPINB2P05120 415 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 BFSP1Q12934 665 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
VAMP1-201ENST00000361716 BBS9Q3SYG4 887 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 TNFAIP8L3Q5GJ75 292 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
VAMP1-201ENST00000361716 RBM15BQ8NDT2 890 aaKnown RBP13.34□□□□□ -0.27
VAMP1-201ENST00000361716 CNBD2Q96M20 576 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 TMEM117Q9H0C3 514 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 NUP98P52948 1817 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 LOC100653049A0A140TA62 436 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 ADCY3O60266 1144 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 KRT34O76011 436 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 VAMP7P51809 220 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 AQP4P55087 323 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 SOX10P56693 466 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 DLG1Q12959 904 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 CYTH1Q15438 398 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 ZNF772Q68DY9 489 aaPredicted RBP13.34□□□□□ -0.27
VAMP1-201ENST00000361716 PAOXQ6QHF9 649 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 SHKBP1Q8TBC3 707 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 TEKT1Q969V4 418 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 LXNQ9BS40 222 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 PCDHA3Q9Y5H8 950 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 AK5Q9Y6K8 562 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 KAT6AQ92794 2004 aa13.34□□□□□ -0.27
VAMP1-201ENST00000361716 TCP10L2B9ZVM9 353 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 MT-ND3P03897 115 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 TNNI1P19237 187 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 ARSEP51690 589 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 SLC25A3Q00325 362 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 SESTD1Q86VW0 696 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 CCDC89Q8N998 374 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 OR6Y1Q8NGX8 325 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 NR1H4Q96RI1 486 aaPredicted RBP13.33□□□□□ -0.27
VAMP1-201ENST00000361716 SLC13A1Q9BZW2 595 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.27
VAMP1-201ENST00000361716 SAR1AQ9NR31 198 aa13.33□□□□□ -0.27
VAMP1-201ENST00000361716 SMG5Q9UPR3 1016 aaKnown RBP13.33□□□□□ -0.27
VAMP1-201ENST00000361716 SGK1O00141 431 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 LPXNO60711 386 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 PPP3CAQ08209 521 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 CYLC2Q14093 348 aaPredicted RBP13.33□□□□□ -0.28
VAMP1-201ENST00000361716 TCHHL1Q5QJ38 904 aaPredicted RBP13.33□□□□□ -0.28
VAMP1-201ENST00000361716 MIER3Q7Z3K6 550 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 PALM2Q8IXS6 379 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 ACAP3Q96P50 834 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 PCDHB18PQ96TA0 734 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 P2RX7Q99572 595 aaKnown RBP13.33□□□□□ -0.28
VAMP1-201ENST00000361716 HERPUD2Q9BSE4 406 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 ZNF395Q9H8N7 513 aaPredicted RBP13.33□□□□□ -0.28
VAMP1-201ENST00000361716 ZNF180Q9UJW8 692 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 HEMK1Q9Y5R4 338 aaPredicted RBP13.33□□□□□ -0.28
VAMP1-201ENST00000361716 GGPS1O95749 300 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 CLPTM1O96005 669 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 TMPRSS15P98073 1019 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 ABCB5Q2M3G0 1257 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 PABPC1LQ4VXU2 614 aaKnown RBP13.33□□□□□ -0.28
VAMP1-201ENST00000361716 GALNT4Q8N4A0 578 aa13.33□□□□□ -0.28
VAMP1-201ENST00000361716 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 MEIS2O14770 477 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 ECE2O60344 883 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 NDUFB10O96000 172 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 NELFEP18615 380 aaKnown RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 PEX2P28328 305 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 MARSP56192 900 aaKnown RBP13.32□□□□□ -0.28
VAMP1-201ENST00000361716 TFDP1Q14186 410 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 GSTA3Q16772 222 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 SFT2D3Q587I9 215 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 SYDE2Q5VT97 1194 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 CDC42EP5Q6NZY7 148 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 PADI6Q6TGC4 694 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 CBWD2Q8IUF1 395 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 GLIS1Q8NBF1 620 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 GDPD5Q8WTR4 605 aa13.32□□□□□ -0.28
VAMP1-201ENST00000361716 OXNAD1Q96HP4 312 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms