RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 SLFN13Q68D06 897 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 THUMPD3Q9BV44 507 aaKnown RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 VPS33BQ9H267 617 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 NPATQ14207 1427 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 SCN4BQ8IWT1 228 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 GIMAP8Q8ND71 665 aaPredicted RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 ZNF671Q8TAW3 534 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 RBM15Q96T37 977 aaKnown RBP eCLIP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 DGKIO75912 1065 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 EID3Q8N140 333 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 PFDN2Q9UHV9 154 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 IFT140Q96RY7 1462 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 EIF3LQ9Y262 564 aaKnown RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 USP17L12C9JPN9 530 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 USP17L21D6R901 530 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 LRRC41Q15345 812 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 OTOAQ7RTW8 1153 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 CLCC1Q96S66 551 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 GCKRQ14397 625 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 TMEM63BQ5T3F8 832 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 CASP12Q6UXS9 341 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 ARHGEF26Q96DR7 871 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 SERPINB12Q96P63 405 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 TMEM79Q9BSE2 394 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 YY1P25490 414 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 CDK17Q00537 523 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 TRMT5Q32P41 509 aaKnown RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 RASSF6Q6ZTQ3 369 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 LBHD1Q9BQE6 289 aaPredicted RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 TRAPPC8Q9Y2L5 1435 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 MTERF2Q49AM1 385 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 RORBQ92753 470 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 RNPC3Q96LT9 517 aaKnown RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 TIMM44O43615 452 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 TAF5LO75529 589 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 POLBP06746 335 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 RALAP11233 206 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 CHRNA2Q15822 529 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 EAPPQ56P03 285 aaPredicted RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 PRXQ9BXM0 1461 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 CLDN3O15551 220 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 KPNA6O60684 536 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 FAM58BPP0C7Q3 252 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 CALB2P22676 271 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 TIGD7Q6NT04 549 aaPredicted RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 TBCKQ8TEA7 893 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 SUCLG2Q96I99 432 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 COMMD8Q9NX08 183 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 KLHL41O60662 606 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 PHF2O75151 1096 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 MMP1P03956 469 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 EIF4A2Q14240 407 aaKnown RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 ATG16L2Q8NAA4 619 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 SCFD2Q8WU76 684 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 MANSC1Q9H8J5 431 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 DOLKQ9UPQ8 538 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 POLR1DQ9Y2S0 133 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 SCP2P22307 547 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 AP3S1Q92572 193 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 PCP4L1A6NKN8 68 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 MSR1P21757 451 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 ENOSF1Q7L5Y1 443 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 NLRP10Q86W26 655 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 BDH2Q9BUT1 245 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 APOL5Q9BWW9 433 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 TRAF3Q13114 568 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 USF2Q15853 346 aaPredicted RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 ABCA5Q8WWZ7 1642 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 A0A0D9SFI3 127 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 AP3D1O14617 1153 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 ITIH4Q14624 930 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 RGS21Q2M5E4 152 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 MSANTD1Q6ZTZ1 278 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 OOSP2Q86WS3 158 aa8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 KCTD14Q9BQ13 255 aaPredicted RBP8.74□□□□□ -1.01
NCKAP1-202ENST00000361354 RPAP1Q9BWH6 1393 aaPredicted RBP8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 OCLNQ16625 522 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 MMGT1Q8N4V1 131 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 SFI1A8K8P3 1242 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 SASH1O94885 1247 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 ATP6V1B2P21281 511 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 SRP54P61011 504 aaKnown RBP8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 PDXDC2PQ6P474 469 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 MGAT4AQ9UM21 535 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 BMP10O95393 424 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 SMAD1Q15797 465 aaKnown RBP8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 XXYLT1Q8NBI6 393 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 ROGDIQ9GZN7 287 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 FAM20BO75063 409 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 ZNF682O95780 498 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 PYHIN1Q6K0P9 492 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 LRRC71Q8N4P6 559 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 HEATR9A2RTY3 570 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 FAM172AQ8WUF8 416 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 TNIP3Q96KP6 325 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 TMEM138Q9NPI0 162 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 EHD3Q9NZN3 535 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 MAPRE3Q9UPY8 281 aa8.73□□□□□ -1.01
NCKAP1-202ENST00000361354 ZCCHC8Q6NZY4 707 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms