RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 GRAMD1AQ96CP6 724 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 VCPIP1Q96JH7 1222 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 KIAA1586Q9HCI6 787 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 TOPORSQ9NS56 1045 aaPredicted RBP13.13□□□□□ -0.31
UBA3-202ENST00000361055 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 NINJ2Q9NZG7 142 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 NAALADL1Q9UQQ1 740 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 A0A1B0GUA9 196 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 PSTPIP1O43586 416 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 CDH16O75309 829 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 UBOX5O94941 541 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 NQO1P15559 274 aaKnown RBP13.13□□□□□ -0.31
UBA3-202ENST00000361055 ABCD1P33897 745 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 RTP1P59025 263 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 MPP2Q14168 576 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 GJC2Q5T442 439 aaPredicted RBP13.13□□□□□ -0.31
UBA3-202ENST00000361055 LIN9Q5TKA1 542 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 NUGGCQ68CJ6 796 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 PLA2G4FQ68DD2 849 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 ANO5Q75V66 913 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 SPATA21Q7Z572 469 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 TBC1D1Q86TI0 1168 aaPredicted RBP13.13□□□□□ -0.31
UBA3-202ENST00000361055 RHOT1Q8IXI2 618 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 PPTC7Q8NI37 304 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 RAET1EQ8TD07 263 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 ATG4AQ8WYN0 398 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 MAGEB18Q96M61 343 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 HERPUD2Q9BSE4 406 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 ZNF302Q9NR11 478 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 AGAP1Q9UPQ3 857 aa13.13□□□□□ -0.31
UBA3-202ENST00000361055 MAFBQ9Y5Q3 323 aaPredicted RBP13.13□□□□□ -0.31
UBA3-202ENST00000361055 CYBAP13498 195 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 COPS2P61201 443 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 NCALDP61601 193 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 LMNB2Q03252 620 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 LLGL1Q15334 1064 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 WDR44Q5JSH3 913 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 FAM160B1Q5W0V3 765 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 PPP1R2P3Q6NXS1 205 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 PPP1R21Q6ZMI0 780 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 TRIM72Q6ZMU5 477 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 ZNF365Q70YC5 407 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 KATNAL2Q8IYT4 538 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 RIBC1Q8N443 379 aaPredicted RBP13.12□□□□□ -0.31
UBA3-202ENST00000361055 MGARPQ8TDB4 240 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 CPA5Q8WXQ8 436 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 ZNF516Q92618 1163 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 TRIM7Q9C029 511 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 ATP6V0A4Q9HBG4 840 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 MRPL47Q9HD33 250 aaKnown RBP13.12□□□□□ -0.31
UBA3-202ENST00000361055 PDLIM7Q9NR12 457 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 C1orf112Q9NSG2 853 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 BAIAP2L1Q9UHR4 511 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 KCNG1Q9UIX4 513 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 GNEQ9Y223 722 aaKnown RBP13.12□□□□□ -0.31
UBA3-202ENST00000361055 ARID2Q68CP9 1835 aa13.12□□□□□ -0.31
UBA3-202ENST00000361055 ADCY6O43306 1168 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 ADCY3O60266 1144 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 ABHD2P08910 425 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 CLTAP09496 248 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 RALAP11233 206 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 AKR1A1P14550 325 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 NSFP46459 744 aaKnown RBP13.11□□□□□ -0.31
UBA3-202ENST00000361055 TRIP13Q15645 432 aaPredicted RBP13.11□□□□□ -0.31
UBA3-202ENST00000361055 CYP4X1Q8N118 509 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 OR6J1Q8NGC5 347 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 EXD1Q8NHP7 514 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 TCP11Q8WWU5 503 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 BSNDQ8WZ55 320 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 IFT74Q96LB3 600 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 ECT2Q9H8V3 914 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 RXFP1Q9HBX9 757 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 NKIRAS1Q9NYS0 192 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 R3HDM2Q9Y2K5 976 aaKnown RBP13.11□□□□□ -0.31
UBA3-202ENST00000361055 Q9Y3F1 56 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 CEP350Q5VT06 3117 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 ADGRA3Q8IWK6 1321 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 H0YCG3 227 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 ZNF862O60290 1169 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 LGR5O75473 907 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 ALADP13716 330 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 STX2P32856 288 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 STAT5BP51692 787 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■□□□□ 9.1
UBA3-202ENST00000361055 NR1H3Q13133 447 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 RNF43Q68DV7 783 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 MON1BQ7L1V2 547 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 ANKRD42Q8N9B4 389 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.11□□□□□ -0.31
UBA3-202ENST00000361055 PCYT2Q99447 389 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 PI4K2AQ9BTU6 479 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 KIFC3Q9BVG8 833 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 OSBPL8Q9BZF1 889 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 EURLQ9NYK6 297 aa13.11□□□□□ -0.31
UBA3-202ENST00000361055 EXTL3O43909 919 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 STBD1O95210 358 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 C4BPAP04003 597 aaKnown RBP13.1□□□□□ -0.31
UBA3-202ENST00000361055 HMGCRP04035 888 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms