RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ELAVL2Q12926 359 aaKnown RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 EXD1Q8NHP7 514 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 C20orf96Q9NUD7 363 aaPredicted RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 IMPAD1Q9NX62 359 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 SNX9Q9Y5X1 595 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 KANSL1LA0AUZ9 987 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 ALOX15P16050 662 aaPredicted RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 IL31Q6EBC2 164 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 OTUD5Q96G74 571 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 RNPC3Q96LT9 517 aaKnown RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 KRT84Q9NSB2 600 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 TRPM5Q9NZQ8 1165 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 DYRK1BQ9Y463 629 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 CETPP11597 493 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 NECTIN1Q15223 517 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 ERAP2Q6P179 960 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 SYBUQ9NX95 663 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 DRG1Q9Y295 367 aaKnown RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 QRICH2Q9H0J4 1663 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 CAMK2GQ13555 558 aaPredicted RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 ITGA9Q13797 1035 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 CCDC144BQ3MJ40 725 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 GTF2A2P52657 109 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 C16orf62Q7Z3J2 963 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 THOC1Q96FV9 657 aaKnown RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 CCT7Q99832 543 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 OSBPL1AQ9BXW6 950 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 TMEM8AQ9HCN3 771 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 RAB6BQ9NRW1 208 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 CYP26A1O43174 497 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 FCGRTP55899 365 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 NFIAQ12857 509 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 CLEC16AQ2KHT3 1053 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 ARHGAP17Q68EM7 881 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 P3H2Q8IVL5 708 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 ALDH8A1Q9H2A2 487 aaPredicted RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 SRP68Q9UHB9 627 aaKnown RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 ADGRA2Q96PE1 1338 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 PMS1P54277 932 aaKnown RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 KDSRQ06136 332 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 ZNF177Q13360 481 aaPredicted RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 CYLC2Q14093 348 aaPredicted RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 GLB1LQ6UWU2 654 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 LRRC8DQ7L1W4 858 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 XPO7Q9UIA9 1087 aaKnown RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 CACNB2Q08289 660 aaPredicted RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 C10orf120Q5SQS8 335 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 CYP4Z1Q86W10 505 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 PARVBQ9HBI1 364 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 FCGR1AP12314 374 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 MB21D2Q8IYB1 491 aaPredicted RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 RMND5AQ9H871 391 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 CRLS1Q9UJA2 301 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 MYO7AQ13402 2215 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 C17orf102A2RUQ5 167 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 NCF4Q15080 339 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 CCDC142Q17RM4 750 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 USP39Q53GS9 565 aaKnown RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 LDHDQ86WU2 507 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.08□□□□□ -0.8
CUX1-203ENST00000360264 AIFM3Q96NN9 605 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 HMGCS2P54868 508 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 DCAF6Q58WW2 860 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 SGMS1Q86VZ5 419 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 TMEM143Q96AN5 459 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 A0A1B0GTH6 734 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 FAM47DPA6NHR8 397 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 RPS6KA5O75582 802 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 CLK1P49759 484 aaKnown RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 RENBPP51606 427 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 NFRKBQ6P4R8 1299 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 FBXO38Q6PIJ6 1188 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 CNDP1Q96KN2 507 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 AGAP3Q96P47 875 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 DDX28Q9NUL7 540 aaKnown RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 NAGPAQ9UK23 515 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 VPS26AO75436 327 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 ZNF543Q08ER8 600 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 DSG4Q86SJ6 1040 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 ADAM21Q9UKJ8 722 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 C6orf222P0C671 652 aaPredicted RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 MRNIPQ6NTE8 343 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 IKBIPQ70UQ0 350 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 MICALL2Q8IY33 904 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 SERPINB12Q96P63 405 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 EEF2KO00418 725 aaKnown RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 GEMIN4P57678 1058 aaKnown RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 ZCCHC8Q6NZY4 707 aaKnown RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 C11orf88Q6PI97 169 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 C3orf62Q6ZUJ4 267 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.07□□□□□ -0.86e-12■■■■■ 49.8
CUX1-203ENST00000360264 ANKRD49Q8WVL7 239 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 PRDX5P30044 214 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 OXCT1P55809 520 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 RIN2Q8WYP3 895 aaPredicted RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 SLC39A10Q9ULF5 831 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 MRFAP1Q9Y605 127 aa10.07□□□□□ -0.8
CUX1-203ENST00000360264 MORC2Q9Y6X9 1032 aaPredicted RBP10.07□□□□□ -0.8
CUX1-203ENST00000360264 CACNB3P54284 484 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms