RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 DEPDC1Q5TB30 811 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 RNASEH2BQ5TBB1 312 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CIAPIN1Q6FI81 312 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CCDC80Q76M96 950 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PEX26Q7Z412 305 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 LIX1LQ8IVB5 337 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 SCYL3Q8IZE3 742 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 DCAKDQ8WVC6 231 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ARHGEF2Q92974 986 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 LENG9Q96B70 501 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 FAM20AQ96MK3 541 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 NUDCD1Q96RS6 583 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PLVAPQ9BX97 442 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ANKRD60Q9BZ19 345 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 SLC13A1Q9BZW2 595 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PCDH9Q9HC56 1237 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 APEX2Q9UBZ4 518 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ARMCX3Q9UH62 379 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 RSL24D1Q9UHA3 163 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TRPC5Q9UL62 973 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ZNF232Q9UNY5 417 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 FAM32AQ9Y421 112 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 A3GALT2U3KPV4 340 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TCP11X1B4DZS4 312 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ZNF195O14628 629 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TRDMT1O14717 391 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 NKRFO15226 690 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ACOX3O15254 700 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 MAP3K7O43318 606 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CA12O43570 354 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PPP1R12BO60237 982 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CYP19A1P11511 503 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 CHRNB2P17787 502 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 KRT15P19012 456 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 KCNA3P22001 575 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 HLA-FP30511 346 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PHKA2P46019 1235 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ZNF132P52740 706 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 NR1H2P55055 460 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 MTTPP55157 894 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 DLG4P78352 724 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 GCNT1Q02742 428 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ZNF423Q2M1K9 1284 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 KCTD16Q68DU8 428 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ZNF772Q68DY9 489 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PHLDB3Q6NSJ2 640 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PPP4R4Q6NUP7 873 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PIK3AP1Q6ZUJ8 805 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 EEPD1Q7L9B9 569 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 OTOAQ7RTW8 1153 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PHF13Q86YI8 300 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 SLC15A3Q8IY34 581 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TTC5Q8N0Z6 440 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 SCAIQ8N9R8 606 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 WDR60Q8WVS4 1066 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 EME1Q96AY2 570 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 TBC1D20Q96BZ9 403 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 VMP1Q96GC9 406 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 SCLT1Q96NL6 688 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 LSM14BQ9BX40 385 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 DNAJC18Q9H819 358 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PLGRKTQ9HBL7 147 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 DCP1AQ9NPI6 582 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 KCNQ5Q9NR82 932 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 PSMC3IPQ9P2W1 217 aaPredicted RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 BAIAP2L1Q9UHR4 511 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 DBR1Q9UK59 544 aaKnown RBP4.76□□□□□ -1.65
PTPN22-201ENST00000359785 UGT2A1Q9Y4X1 527 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 SNCAIPQ9Y6H5 919 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 STYXL1Q9Y6J8 313 aa4.76□□□□□ -1.65
PTPN22-201ENST00000359785 ADGRA2Q96PE1 1338 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 NUP210LQ5VU65 1888 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 ARHGAP10A1A4S6 786 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 KCNK3O14649 394 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 ZMYND10O75800 440 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 IDH1O75874 414 aaKnown RBP4.75□□□□□ -1.65
PTPN22-201ENST00000359785 TNFAIP8O95379 198 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 PIGRP01833 764 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 TROVE2P10155 538 aaKnown RBP eCLIP4.75□□□□□ -1.65
PTPN22-201ENST00000359785 ITGA4P13612 1032 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 KCNA5P22460 613 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 HOXA10P31260 410 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-201ENST00000359785 GALCP54803 685 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 AP2B1P63010 937 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 TAP1Q03518 808 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 HSPA14Q0VDF9 509 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 KCNH2Q12809 1159 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 TRAP1Q12931 704 aaKnown RBP4.75□□□□□ -1.65
PTPN22-201ENST00000359785 ACAP1Q15027 740 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 KLHL38Q2WGJ6 581 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 CCDC153Q494R4 210 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 KHDC1Q4VXA5 237 aaKnown RBP4.75□□□□□ -1.65
PTPN22-201ENST00000359785 FAM26FQ5R3K3 315 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 POTEAQ6S8J7 498 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 NCCRP1Q6ZVX7 275 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-201ENST00000359785 TBC1D1Q86TI0 1168 aaPredicted RBP4.75□□□□□ -1.65
PTPN22-201ENST00000359785 PAPD5Q8NDF8 572 aaKnown RBP4.75□□□□□ -1.65
PTPN22-201ENST00000359785 FLAD1Q8NFF5 587 aa4.75□□□□□ -1.65
PTPN22-201ENST00000359785 RIN3Q8TB24 985 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms