RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 TRANK1O15050 2925 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 RALGAPA2Q2PPJ7 1873 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 A0A0U1RQJ8 604 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 ARHGEF37A1IGU5 675 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 LPXNO60711 386 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 TADA3O75528 432 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 CSDE1O75534 798 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 CST3P01034 146 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 CYP1A2P05177 515 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 MMEP08473 750 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 NFICP08651 508 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 KCNE1P15382 129 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 IGFBP4P22692 258 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 HOXA11P31270 313 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 CETN2P41208 172 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 SLC1A1P43005 524 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 CENPCQ03188 943 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 SV2CQ496J9 727 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 GLE1Q53GS7 698 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 PLEKHG4Q58EX7 1191 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 SLFN11Q7Z7L1 901 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 CDR2LQ86X02 465 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 GPIHBP1Q8IV16 184 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 EFCAB13Q8IY85 973 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 CEP120Q8N960 986 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 C1orf127Q8N9H9 656 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 SLC20A1Q8WUM9 679 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 ATRIPQ8WXE1 791 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 SLC9A7Q96T83 725 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 PACSIN1Q9BY11 444 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 BCO2Q9BYV7 579 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 APOBEC3GQ9HC16 384 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.581e-22■■■■■ 419.2
TRAPPC4-201ENST00000359005 SNTG2Q9NY99 539 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 WDR35Q9P2L0 1181 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 NXF1Q9UBU9 619 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 PARP2Q9UGN5 583 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 CDY2AQ9Y6F7 541 aa11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 PRRC2BQ5JSZ5 2229 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-201ENST00000359005 ABHD14A-ACY1A0A1B0GW23 586 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 BAIAP3O94812 1187 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 GJB5O95377 273 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 ABL1P00519 1130 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 CYP1A1P04798 512 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 VDRP11473 427 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 ITGA4P13612 1032 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 CHRNB2P17787 502 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 CD58P19256 250 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 ZNF132P52740 706 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 MGAT3Q09327 533 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 PAK2Q13177 524 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 MAP9Q49MG5 647 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 FAM26DQ5JW98 314 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 TEX35Q5T0J7 233 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 SPOPLQ6IQ16 392 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 ZNF572Q7Z3I7 529 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 UNC93AQ86WB7 457 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 PHF13Q86YI8 300 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 ZNF606Q8WXB4 792 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 ARNTL2Q8WYA1 636 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 DDX1Q92499 740 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 THAP2Q9H0W7 228 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 XYLT2Q9H1B5 865 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 LHX5Q9H2C1 402 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 PARVAQ9NVD7 372 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 ADAM22Q9P0K1 906 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 CNOT8Q9UFF9 292 aaKnown RBP11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 BARX2Q9UMQ3 279 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 TFR2Q9UP52 801 aa11.42□□□□□ -0.58
TRAPPC4-201ENST00000359005 GOLGA6L10A0A0M3HER8 536 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 TARSL2A2RTX5 802 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 CCDC66A2RUB6 948 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 CCDC188H7C350 402 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 MYO1FO00160 1098 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 TLL1O43897 1013 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 RECQL4O94761 1208 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 GHRP10912 638 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 UNGP13051 313 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 CD19P15391 556 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 ASPAP45381 313 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 WNT7BP56706 349 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 SLC8A3P57103 927 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 IKBKEQ14164 716 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 SGO2Q562F6 1265 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 RSRC2Q7L4I2 434 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 MCOLN2Q8IZK6 566 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 UBR7Q8N806 425 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 LRRC57Q8N9N7 239 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 ZNF564Q8TBZ8 553 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 MAIP1Q8WWC4 291 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 TMEM176AQ96HP8 235 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 MMS19Q96T76 1030 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 NUP85Q9BW27 656 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 TRAIPQ9BWF2 469 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 NT5C1AQ9BXI3 368 aa11.41□□□□□ -0.58
TRAPPC4-201ENST00000359005 TLR10Q9BXR5 811 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms