RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 ZC3H18Q86VM9 953 aaKnown RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 DHRS4Q9BTZ2 278 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 AMNQ9BXJ7 453 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 ST6GALNAC4Q9H4F1 302 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 EPB41L1Q9H4G0 881 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 PCMTD2Q9NV79 361 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 ZDHHC7Q9NXF8 308 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 SERPINB13Q9UIV8 391 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 ZNF112Q9UJU3 913 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 FAM86B1E9PN63 330 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 ATP2A1O14983 1001 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 TBX10O75333 385 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 CSDE1O75534 798 aaKnown RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 FAM86B2P0C5J1 330 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 RARBP10826 455 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 KRT15P19012 456 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 CETN2P41208 172 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 POLE2P56282 527 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 XIAPP98170 497 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 HNRNPDQ14103 355 aaKnown RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 TRMT5Q32P41 509 aaKnown RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 CCDC62Q6P9F0 684 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 RFWD3Q6PCD5 774 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 DSTYKQ6XUX3 929 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 SEPT14Q6ZU15 432 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 EXD1Q8NHP7 514 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 MCUR1Q96AQ8 359 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 OPTNQ96CV9 577 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 C9orf72Q96LT7 481 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 SPATA16Q9BXB7 569 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 C17orf75Q9HAS0 396 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 KANSL3Q9P2N6 904 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 ATXN10Q9UBB4 475 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 PHF24Q9UPV7 400 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 FOXO6A8MYZ6 492 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 SPAG7O75391 227 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 KRT36O76013 467 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 LYNP07948 512 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 CRABP2P29373 138 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 MXI1P50539 228 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 CDK7P50613 346 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 PPP3CAQ08209 521 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 TBCCQ15814 346 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 PKN2Q16513 984 aaKnown RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 PABPC1LQ4VXU2 614 aaKnown RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 C1orf220Q5T0J3 134 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 ZNF746Q6NUN9 644 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 VPS52Q8N1B4 723 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 ZNF276Q8N554 614 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 DDX1Q92499 740 aaKnown RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 KRT82Q9NSB4 513 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 DRG1Q9Y295 367 aaKnown RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 DOCK1Q14185 1865 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 SMAPO00193 183 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 KLF11O14901 512 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 HGSO14964 777 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-205ENST00000357568 FAM155BO75949 473 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 PROSCO94903 275 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 SLITRK3O94933 977 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 GSTT1P30711 240 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 GTF2H1P32780 548 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 PTPN7P35236 360 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 GPC3P51654 580 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 ODR4Q5SWX8 454 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 PCNX4Q63HM2 1172 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 TATDN1Q6P1N9 297 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 LVRNQ6Q4G3 990 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 OTOP1Q7RTM1 612 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 LCA5Q86VQ0 697 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 RHOT1Q8IXI2 618 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 PHC3Q8NDX5 983 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 PIP4K2CQ8TBX8 421 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 ATG4AQ8WYN0 398 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 SLC5A5Q92911 643 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 PPP2R3CQ969Q6 453 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 KREMEN1Q96MU8 473 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 ACCSQ96QU6 501 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 RANBP17Q9H2T7 1088 aaKnown RBP11.21□□□□□ -0.61
CAPN3-205ENST00000357568 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.21□□□□□ -0.61
CAPN3-205ENST00000357568 SAYSD1Q9NPB0 183 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 NYAP2Q9P242 653 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 ANAPC7Q9UJX3 599 aa11.21□□□□□ -0.61
CAPN3-205ENST00000357568 IGLV3-22A0A075B6J6 115 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 FAM196BA6NMK8 535 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 ATMINO43313 823 aaPredicted RBP11.21□□□□□ -0.62
CAPN3-205ENST00000357568 PSMD10O75832 226 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 SHMT1P34896 483 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 PHBP35232 272 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 IREB2P48200 963 aaKnown RBP11.21□□□□□ -0.62
CAPN3-205ENST00000357568 ARFIP2P53365 341 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 GEMIN4P57678 1058 aaKnown RBP11.21□□□□□ -0.62
CAPN3-205ENST00000357568 LSAMPQ13449 338 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 KLHL38Q2WGJ6 581 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 WDR72Q3MJ13 1102 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 NOL9Q5SY16 702 aaKnown RBP11.21□□□□□ -0.62
CAPN3-205ENST00000357568 C6orf163Q5TEZ5 329 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 AAGABQ6PD74 315 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 CENPUQ71F23 418 aa11.21□□□□□ -0.62
CAPN3-205ENST00000357568 SYCP3Q8IZU3 236 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms