RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 CLCN6P51797 869 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 ARFIP2P53365 341 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 ARL4CP56559 192 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 PTPN20Q4JDL3 420 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 TATDN2Q93075 761 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 ADARB2Q9NS39 739 aaKnown RBP7.68□□□□□ -1.18
VPS13A-202ENST00000357409 ATPAF2Q8N5M1 289 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 PPP2R3CQ969Q6 453 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 THTPAQ9BU02 230 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 OSBPL2Q9H1P3 480 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 HMX1Q9NP08 348 aaPredicted RBP7.68□□□□□ -1.18
VPS13A-202ENST00000357409 SAE1Q9UBE0 346 aaPredicted RBP7.68□□□□□ -1.18
VPS13A-202ENST00000357409 USP12O75317 370 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 ALDH1A2O94788 518 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 PPATQ06203 517 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 SNRNP35Q16560 246 aaKnown RBP7.68□□□□□ -1.18
VPS13A-202ENST00000357409 PLA2G4EQ3MJ16 856 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 XKR3Q5GH77 459 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 PARP8Q8N3A8 854 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 CYP2W1Q8TAV3 490 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 MDM1Q8TC05 714 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 EXOC2Q96KP1 924 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 DEFB118Q96PH6 123 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 TM6SF2Q9BZW4 377 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 SCINQ9Y6U3 715 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 C3orf70A6NLC5 250 aaPredicted RBP7.68□□□□□ -1.18
VPS13A-202ENST00000357409 ERI2A8K979 691 aaKnown RBP7.68□□□□□ -1.18
VPS13A-202ENST00000357409 SEPT4O43236 478 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 GRK2P25098 689 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 AP3B2Q13367 1082 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 TFDP2Q14188 446 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 SPOCD1Q6ZMY3 1216 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 BTN2A1Q7KYR7 527 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 MILR1Q7Z6M3 343 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 TLR8Q9NR97 1041 aaKnown RBP7.68□□□□□ -1.18
VPS13A-202ENST00000357409 DNMBPQ6XZF7 1577 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 MYO1DO94832 1006 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 GSTM1P09488 218 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 BDNFP23560 247 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 RBP5P82980 135 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 SEMG2Q02383 582 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 OOSP2Q86WS3 158 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 CORO1BQ9BR76 489 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 COLEC11Q9BWP8 271 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 XPNPEP3Q9NQH7 507 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 ZFP69BQ9UJL9 534 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 DUOX2Q9NRD8 1548 aa7.68□□□□□ -1.18
VPS13A-202ENST00000357409 HNRNPH2P55795 449 aaKnown RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 PTGISQ16647 500 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 UPF3AQ9H1J1 476 aaKnown RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ACSS2Q9NR19 701 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 MRFAP1Q9Y605 127 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 CLDN5O00501 218 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 NFKBIAP25963 317 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 CPT1AP50416 773 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 PLPP4Q5VZY2 271 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 CLEC4GQ6UXB4 293 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ANKS3Q6ZW76 656 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 TRPC4Q9UBN4 977 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 DUSP10Q9Y6W6 482 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 CAND2O75155 1236 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 CXCL8P10145 99 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 STMN1P16949 149 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 TFE3P19532 575 aaPredicted RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 RPS7P62081 194 aaKnown RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 FNDC3BQ53EP0 1204 aaKnown RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ARHGAP15Q53QZ3 475 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 RESP18Q5W5W9 173 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 PLEKHH3Q7Z736 793 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 KLK6Q92876 244 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 PACSIN3Q9UKS6 424 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 GPSM3Q9Y4H4 160 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 O00370 1275 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 KPNA3O00505 521 aaPredicted RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 SKIP12755 728 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 HALP42357 657 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 WASHC5Q12768 1159 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 MAPRE1Q15691 268 aaKnown RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 NLRP9Q7RTR0 991 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 GFM2Q969S9 779 aaKnown RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 OSBPL9Q96SU4 736 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 GPR108Q9NPR9 543 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ZBTB22O15209 634 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 KIF1CO43896 1103 aaKnown RBP7.67□□□□□ -1.18
VPS13A-202ENST00000357409 CAMTA2O94983 1202 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 EVX2Q03828 476 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 FAM151AQ8WW52 585 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ISCA1Q9BUE6 129 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 BFARQ9NZS9 450 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ANGPT4Q9Y264 503 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 PTPRTO14522 1441 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 TISP43B9A030 160 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 RASSF9O75901 435 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 RASA1P20936 1047 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 MSH4O15457 936 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 IYDQ6PHW0 289 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 CBWD2Q8IUF1 395 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 FAM167AQ96KS9 214 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 SLITRK1Q96PX8 696 aa7.67□□□□□ -1.18
VPS13A-202ENST00000357409 ERAP1Q9NZ08 941 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms