RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 BEST2Q8NFU1 509 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 CALR3Q96L12 384 aaKnown RBP11.79□□□□□ -0.52
ABCD4-201ENST00000356924 NUP85Q9BW27 656 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 CAPS2Q9BXY5 557 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 ELOVL4Q9GZR5 314 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 HMX1Q9NP08 348 aaPredicted RBP11.79□□□□□ -0.52
ABCD4-201ENST00000356924 SMARCAL1Q9NZC9 954 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 CNOT8Q9UFF9 292 aaKnown RBP11.79□□□□□ -0.52
ABCD4-201ENST00000356924 CILPO75339 1184 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 CALRP27797 417 aaKnown RBP11.79□□□□□ -0.52
ABCD4-201ENST00000356924 RPS6KA1Q15418 735 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 TWF2Q6IBS0 349 aaKnown RBP11.79□□□□□ -0.52
ABCD4-201ENST00000356924 B4GALNT4Q76KP1 1039 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 PEX26Q7Z412 305 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 PHF13Q86YI8 300 aaPredicted RBP11.79□□□□□ -0.52
ABCD4-201ENST00000356924 SLC4A11Q8NBS3 891 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 HES6Q96HZ4 224 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 MS4A14Q96JA4 679 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 UBQLN1Q9UMX0 589 aaKnown RBP11.79□□□□□ -0.52
ABCD4-201ENST00000356924 PCDHGC3Q9UN70 934 aa11.79□□□□□ -0.52
ABCD4-201ENST00000356924 PPP1R12AO14974 1030 aaPredicted RBP11.78□□□□□ -0.52
ABCD4-201ENST00000356924 CHUKO15111 745 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 DDX3YO15523 660 aaKnown RBP11.78□□□□□ -0.52
ABCD4-201ENST00000356924 DNA2P51530 1060 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 FBXO47Q5MNV8 452 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 C9orf57Q5W0N0 161 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 C11orf63Q6NUN7 778 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 LLGL2Q6P1M3 1020 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 WDTC1Q8N5D0 677 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 OTUD6BQ8N6M0 293 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 SLC43A3Q8NBI5 491 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 TSPAN18Q96SJ8 248 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 AVENQ9NQS1 362 aaPredicted RBP11.78□□□□□ -0.52
ABCD4-201ENST00000356924 CHST12Q9NRB3 414 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 PIRO00625 290 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 PAEPP09466 180 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 CDH5P33151 784 aaPredicted RBP11.78□□□□□ -0.52
ABCD4-201ENST00000356924 SOX4Q06945 474 aaPredicted RBP11.78□□□□□ -0.52
ABCD4-201ENST00000356924 INCA1Q0VD86 236 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 NFX1Q12986 1120 aaKnown RBP11.78□□□□□ -0.52
ABCD4-201ENST00000356924 ORC1Q13415 861 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 ARHGEF6Q15052 776 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 LRRC52Q8N7C0 313 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 ZNF564Q8TBZ8 553 aaPredicted RBP11.78□□□□□ -0.52
ABCD4-201ENST00000356924 UVRAGQ9P2Y5 699 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 AMFRQ9UKV5 643 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 MEIS3P2A8K0S8 358 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 CES2O00748 559 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 PTGESO14684 152 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 EIF3HO15372 352 aaKnown RBP eCLIP11.78□□□□□ -0.52
ABCD4-201ENST00000356924 P4HA1P13674 534 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 RRM1P23921 792 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 ELF1P32519 619 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 NSFP46459 744 aaKnown RBP11.78□□□□□ -0.52
ABCD4-201ENST00000356924 LPIN1Q14693 890 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 C2CD6Q53TS8 623 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 CPNE8Q86YQ8 564 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 BTBD6Q96KE9 485 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 FAM105AQ9NUU6 356 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 TRIM17Q9Y577 477 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 ALG6Q9Y672 507 aa11.78□□□□□ -0.52
ABCD4-201ENST00000356924 A0A1W2PQ45 241 aaPredicted RBP11.77□□□□□ -0.52
ABCD4-201ENST00000356924 A0A1W2PQY0 241 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 GPR182O15218 404 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 MGEA5O60502 916 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 MYBL1P10243 752 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 CD52P31358 61 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 GNGT1P63211 74 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 TNNC1P63316 161 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 C2orf54Q08AI8 447 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 DSC3Q14574 896 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 KCTD19Q17RG1 926 aaPredicted RBP11.77□□□□□ -0.52
ABCD4-201ENST00000356924 DENND1BQ6P3S1 775 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 PHLDB2Q86SQ0 1253 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 MIEF2Q96C03 454 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 TRIM11Q96F44 468 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 C11orf70Q9BRQ4 267 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 PADI3Q9ULW8 664 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 NME7Q9Y5B8 376 aa11.77□□□□□ -0.52
ABCD4-201ENST00000356924 LSM8O95777 96 aaKnown RBP11.77□□□□□ -0.53
ABCD4-201ENST00000356924 GHRP10912 638 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 MYO1EQ12965 1108 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 ZNF618Q5T7W0 954 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 TRAF7Q6Q0C0 670 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 C1orf131Q8NDD1 294 aaKnown RBP11.77□□□□□ -0.53
ABCD4-201ENST00000356924 SH3TC2Q8TF17 1288 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 TMEM176AQ96HP8 235 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 VCPIP1Q96JH7 1222 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 PBKQ96KB5 322 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 GLT1D1Q96MS3 346 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 MRPL45Q9BRJ2 306 aaKnown RBP11.77□□□□□ -0.53
ABCD4-201ENST00000356924 FAM124BQ9H5Z6 455 aaPredicted RBP11.77□□□□□ -0.53
ABCD4-201ENST00000356924 BARX2Q9UMQ3 279 aaPredicted RBP11.77□□□□□ -0.53
ABCD4-201ENST00000356924 PHF24Q9UPV7 400 aa11.77□□□□□ -0.53
ABCD4-201ENST00000356924 HTTP42858 3142 aa11.76□□□□□ -0.53
ABCD4-201ENST00000356924 GOLGA6BA6NDN3 693 aa11.76□□□□□ -0.53
ABCD4-201ENST00000356924 A6NNZ2 444 aa11.76□□□□□ -0.53
ABCD4-201ENST00000356924 TMEM110-MUSTN1A8MSY1 372 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms