RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SMG5Q9UPR3 1016 aaKnown RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 CHMP2BQ9UQN3 213 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 WNK3Q9BYP7 1800 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 C10orf71Q711Q0 1435 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 KIF3CO14782 793 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 BAG2O95816 211 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 ENO1P06733 434 aaKnown RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 CALRP27797 417 aaKnown RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 GNA15P30679 374 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 RAB27AP51159 221 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 OGDHQ02218 1023 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 SMAD1Q15797 465 aaKnown RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 HIF1AQ16665 826 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 SLC45A4Q5BKX6 768 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 CYP4A22Q5TCH4 519 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 FBXO36Q8NEA4 188 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 ZBTB45Q96K62 511 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 SLITRK1Q96PX8 696 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 TTC1Q99614 292 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 BTBD10Q9BSF8 475 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 TSSK1BQ9BXA7 367 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 CYLDQ9NQC7 956 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 RABGEF1Q9UJ41 708 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 TESPA1A2RU30 521 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 H3BRJ5 948 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 HLA-DRAP01903 254 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 FESP07332 822 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 MYL2P10916 166 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 ESRRAP11474 423 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 ACADSP16219 412 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 SLC1A1P43005 524 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 SERPINB4P48594 390 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 CACNA2D1P54289 1103 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 PSMC5P62195 406 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 MRPS9P82933 396 aaKnown RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 KDSRQ06136 332 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 MYBPC2Q14324 1141 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 RBBP5Q15291 538 aaKnown RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 CENPUQ71F23 418 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 BBOF1Q8ND07 529 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 STMN2Q93045 179 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 FAM136AQ96C01 138 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 NMUR2Q9GZQ4 415 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 APOBEC3GQ9HC16 384 aaKnown RBP10.67□□□□□ -0.7
PTPRA-203ENST00000356147 PCDHB2Q9Y5E7 798 aa10.67□□□□□ -0.7
PTPRA-203ENST00000356147 SIGLEC16A6NMB1 481 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 MAP3K6O95382 1288 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 PSMG1O95456 288 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 ETS2P15036 469 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 GCLCP48506 637 aaPredicted RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 GEMIN4P57678 1058 aaKnown RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 ZNF252P-AS1Q0IIN9 211 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 DMP1Q13316 513 aaPredicted RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 MTMR1Q13613 665 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 RNASEH2BQ5TBB1 312 aaKnown RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 LIN9Q5TKA1 542 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 OR52E8Q6IFG1 317 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 ALLCQ8N6M5 410 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 TRIM55Q9BYV6 548 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 CPSF2Q9P2I0 782 aaKnown RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 MRPL11Q9Y3B7 192 aaKnown RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 FOCADQ5VW36 1801 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 CCDC22O60826 627 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 AVILO75366 819 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 CCNE2O96020 404 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 ABHD2P08910 425 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 HOXA10P31260 410 aaPredicted RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 ARL4CP56559 192 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 NLRP11P59045 1033 aaKnown RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 NOMO3P69849 1222 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 IRX4P78413 519 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 TKFCQ3LXA3 575 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 TDRD10Q5VZ19 366 aaKnown RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 CWF19L1Q69YN2 538 aaKnown RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 DCUN1D2Q6PH85 259 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 ANO5Q75V66 913 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 IGDCC3Q8IVU1 814 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 PALM2Q8IXS6 379 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 KATNAL2Q8IYT4 538 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 RIBC1Q8N443 379 aaPredicted RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 ZNF276Q8N554 614 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 EXD1Q8NHP7 514 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 FBXO41Q8TF61 875 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 VTI1AQ96AJ9 217 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 NSL1Q96IY1 281 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 FNBP1Q96RU3 617 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 MOV10L1Q9BXT6 1211 aaKnown RBP10.66□□□□□ -0.7
PTPRA-203ENST00000356147 COQ4Q9Y3A0 265 aa10.66□□□□□ -0.7
PTPRA-203ENST00000356147 ALOX15BO15296 676 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 AHCYL1O43865 530 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 LPXNO60711 386 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 PGM1P36871 562 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 BASP1P80723 227 aaKnown RBP10.65□□□□□ -0.7
PTPRA-203ENST00000356147 WDR44Q5JSH3 913 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 SPOCD1Q6ZMY3 1216 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 C12orf56Q8IXR9 622 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 FEZF2Q8TBJ5 459 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 SERAC1Q96JX3 654 aa10.65□□□□□ -0.7
PTPRA-203ENST00000356147 CEP170P1Q96L14 293 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms