RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 MKL1Q969V6 931 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 NUB1Q9Y5A7 615 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 LUC7L3O95232 432 aaKnown RBP15.97■□□□□ 0.15
STRN3-201ENST00000355683 VIL1P09327 827 aaKnown RBP15.97■□□□□ 0.15
STRN3-201ENST00000355683 RWDD4Q6NW29 188 aaKnown RBP15.97■□□□□ 0.15
STRN3-201ENST00000355683 DEPDC1BQ8WUY9 529 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 PXMP2Q9NR77 195 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 UBP1Q9NZI7 540 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 MYH6P13533 1939 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 GOLGA8TH3BQL2 631 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 PFDN1O60925 122 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 MOCS2O96007 188 aaPredicted RBP15.97■□□□□ 0.15
STRN3-201ENST00000355683 SNHG28P0DPA3 235 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 SUGP1Q8IWZ8 645 aaKnown RBP15.97■□□□□ 0.15
STRN3-201ENST00000355683 DAW1Q8N136 415 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 EFCAB3Q8N7B9 438 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 FEZF2Q8TBJ5 459 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 NOD1Q9Y239 953 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 SCINQ9Y6U3 715 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 MYO9BQ13459 2157 aa15.97■□□□□ 0.15
STRN3-201ENST00000355683 MMRN1Q13201 1228 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 EFTUD2Q15029 972 aaKnown RBP eCLIP15.96■□□□□ 0.152e-7■■■■□ 22.1
STRN3-201ENST00000355683 KIZQ2M2Z5 673 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 ACOT1Q86TX2 421 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 ARMC2Q8NEN0 867 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 CISHQ9NSE2 258 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 SDK1Q7Z5N4 2213 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 WDR46O15213 610 aaKnown RBP15.96■□□□□ 0.15
STRN3-201ENST00000355683 DGKIO75912 1065 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 CTSHP09668 335 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 SFNP31947 248 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 SEPT6Q14141 434 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 DCAF12L1Q5VU92 463 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 EFCAB12Q6NXP0 572 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 MCOLN2Q8IZK6 566 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 SIX2Q9NPC8 291 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 UVRAGQ9P2Y5 699 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 PKD1L3Q7Z443 1732 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 A8MXQ7 604 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 TRAPPC3O43617 180 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 SKIP12755 728 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 TCN1P20061 433 aaPredicted RBP15.96■□□□□ 0.15
STRN3-201ENST00000355683 NAIF1Q69YI7 327 aaPredicted RBP15.96■□□□□ 0.15
STRN3-201ENST00000355683 IL1RAPL1Q9NZN1 696 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 PFASO15067 1338 aa15.96■□□□□ 0.15
STRN3-201ENST00000355683 FAM47DPA6NHR8 397 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 B4GALT5O43286 388 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 CST3P01034 146 aaPredicted RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 RFC1P35251 1148 aaPredicted RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 PSEN1P49768 467 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 SLC8A3P57103 927 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 C15orf59Q2T9L4 293 aaPredicted RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 FBXO36Q8NEA4 188 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 ADAM32Q8TC27 787 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 SGF29Q96ES7 293 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 ACAP3Q96P50 834 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 SNED1Q8TER0 1413 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 USP12O75317 370 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 ARFIP2P53365 341 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 SLC12A1Q13621 1099 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 ANKRD20A8PQ5CZ79 823 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 HABP4Q5JVS0 413 aaKnown RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 CEP128Q6ZU80 1094 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 MTDHQ86UE4 582 aaKnown RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 EXOC3L1Q86VI1 746 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 LRRC57Q8N9N7 239 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 RBM41Q96IZ5 413 aaKnown RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 FAM129AQ9BZQ8 928 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 ANLNQ9NQW6 1124 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 IP6K2Q9UHH9 426 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 KDM3BQ7LBC6 1761 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 A0A1W2PPM1 405 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 EDIL3O43854 480 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 MT-CO1P00395 513 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 RARGP13631 454 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 ITIH2P19823 946 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 MX2P20592 715 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 AUHQ13825 339 aaKnown RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 LRIG3Q6UXM1 1119 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 ARID3BQ8IVW6 561 aaPredicted RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 DDX27Q96GQ7 796 aaKnown RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 HES6Q96HZ4 224 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 OSBPL7Q9BZF2 842 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 A1CFQ9NQ94 594 aaKnown RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 DONSONQ9NYP3 566 aa15.95■□□□□ 0.14
STRN3-201ENST00000355683 TIMM13Q9Y5L4 95 aaPredicted RBP15.95■□□□□ 0.14
STRN3-201ENST00000355683 IGLV3-22A0A075B6J6 115 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.94■□□□□ 0.145e-8■□□□□ 9.7
STRN3-201ENST00000355683 PLEKHO2Q8TD55 490 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 ATP2A3Q93084 1043 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 TRIM11Q96F44 468 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 MRPL4Q9BYD3 311 aaKnown RBP15.94■□□□□ 0.14
STRN3-201ENST00000355683 HOXC10Q9NYD6 342 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 NINJ2Q9NZG7 142 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 TJP2Q9UDY2 1190 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 PHTF1Q9UMS5 762 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 ARFGEF2Q9Y6D5 1785 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 RPS6KA5O75582 802 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 ANP32DO95626 131 aa15.94■□□□□ 0.14
STRN3-201ENST00000355683 ADRA1DP25100 572 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms