RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ZNF212Q9UDV6 495 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 PCDHAC2Q9Y5I4 1007 aa12.02□□□□□ -0.48
CAPN9-202ENST00000354537 C4BPAP04003 597 aaKnown RBP12.02□□□□□ -0.49
CAPN9-202ENST00000354537 CALB1P05937 261 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 DHRS4L1P0CG22 281 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 PTGER2P43116 358 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 GPX6P59796 221 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 ROR2Q01974 943 aaKnown RBP12.02□□□□□ -0.49
CAPN9-202ENST00000354537 CDK18Q07002 472 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 MTMR1Q13613 665 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 CCDC6Q16204 474 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 HIF1AQ16665 826 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 KHDC1Q4VXA5 237 aaKnown RBP12.02□□□□□ -0.49
CAPN9-202ENST00000354537 SLC27A3Q5K4L6 730 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 AP1ARQ63HQ0 302 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 CIAPIN1Q6FI81 312 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 NLRX1Q86UT6 975 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 TTC13Q8NBP0 860 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 SUPT20HQ8NEM7 779 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 SLC35B2Q8TB61 432 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 ACER1Q8TDN7 264 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 NPHS2Q9NP85 383 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 NMRK1Q9NWW6 199 aa12.02□□□□□ -0.49
CAPN9-202ENST00000354537 STX18Q9P2W9 335 aaKnown RBP12.02□□□□□ -0.49
CAPN9-202ENST00000354537 hCG_1818297A0A087WSY0 165 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 F8W8V4 182 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 KLF11O14901 512 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 KRT1P04264 644 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 ATP5BP06576 529 aaKnown RBP12.01□□□□□ -0.49
CAPN9-202ENST00000354537 PAPOLAP51003 745 aaKnown RBP12.01□□□□□ -0.49
CAPN9-202ENST00000354537 ARFIP2P53365 341 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 CDK16Q00536 496 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 AP1B1Q10567 949 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 SPP2Q13103 211 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 CUL2Q13617 745 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 GSTA3Q16772 222 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 PLEKHG4Q58EX7 1191 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 TFDP3Q5H9I0 405 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 SNX30Q5VWJ9 437 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 CWF19L1Q69YN2 538 aaKnown RBP12.01□□□□□ -0.49
CAPN9-202ENST00000354537 TMEM154Q6P9G4 183 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 MFSD7Q6UXD7 560 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 GALNT15Q8N3T1 639 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 NIPA2Q8N8Q9 360 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 PPFIBP2Q8ND30 876 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 ZNF516Q92618 1163 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 SKA1Q96BD8 255 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 SYT15Q9BQS2 421 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 SCOCQ9UIL1 159 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 ZBTB21Q9ULJ3 1066 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 STYXL1Q9Y6J8 313 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 MAGEC1O60732 1142 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 SNUPNO95149 360 aaKnown RBP12.01□□□□□ -0.49
CAPN9-202ENST00000354537 PSMG1O95456 288 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 LSM8O95777 96 aaKnown RBP12.01□□□□□ -0.49
CAPN9-202ENST00000354537 HLA-DRAP01903 254 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 FGFR1P11362 822 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 MMP8P22894 467 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
CAPN9-202ENST00000354537 GNA15P30679 374 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 PEX19P40855 299 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 GCLCP48506 637 aaPredicted RBP12.01□□□□□ -0.49
CAPN9-202ENST00000354537 RAP1GDS1P52306 607 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 PIGHQ14442 188 aaPredicted RBP12.01□□□□□ -0.49
CAPN9-202ENST00000354537 FASTKD3Q14CZ7 662 aaKnown RBP12.01□□□□□ -0.49
CAPN9-202ENST00000354537 DLGAP5Q15398 846 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 WDR72Q3MJ13 1102 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 POLNQ7Z5Q5 900 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 GLIS1Q8NBF1 620 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 PYROXD1Q8WU10 500 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 TEKT4Q8WW24 435 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 PI4K2AQ9BTU6 479 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 DNAJB4Q9UDY4 337 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 TCEAL9Q9UHQ7 104 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 USTQ9Y2C2 406 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 CLUHO75153 1309 aa12.01□□□□□ -0.49
CAPN9-202ENST00000354537 ANKRD31Q8N7Z5 1873 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 MAGEA13PA6NCF6 341 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 GYG2O15488 501 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 SMIM24O75264 130 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 ADRA1DP25100 572 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 SSR1P43307 286 aaKnown RBP12□□□□□ -0.49
CAPN9-202ENST00000354537 MRPS9P82933 396 aaKnown RBP12□□□□□ -0.49
CAPN9-202ENST00000354537 UGCGQ16739 394 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 XRRA1Q6P2D8 792 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 SESTD1Q86VW0 696 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 NAT8LQ8N9F0 302 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 MCPH1Q8NEM0 835 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 TCP10LQ8TDR4 215 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 CLEC4DQ8WXI8 215 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 IFT43Q96FT9 208 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 MASTLQ96GX5 879 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 NGLY1Q96IV0 654 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 FAM118BQ9BPY3 351 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 ZNF518BQ9C0D4 1074 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 FAM192AQ9GZU8 254 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 TDRD3Q9H7E2 651 aaKnown RBP12□□□□□ -0.49
CAPN9-202ENST00000354537 DBNDD1Q9H9R9 158 aa12□□□□□ -0.49
CAPN9-202ENST00000354537 PAPOLBQ9NRJ5 636 aaKnown RBP12□□□□□ -0.49
CAPN9-202ENST00000354537 DDX43Q9NXZ2 648 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms