RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PTPN22Q9Y2R2 807 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 DERAQ9Y315 318 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 NRCAMQ92823 1304 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 YY1P25490 414 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 GSCP56915 257 aaPredicted RBP17.67■□□□□ 0.42
SAMM50-201ENST00000350028 PTPN11Q06124 597 aaPredicted RBP17.67■□□□□ 0.42
SAMM50-201ENST00000350028 CALCOCO2Q13137 446 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 SLMAPQ14BN4 828 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 PCBP1Q15365 356 aaKnown RBP eCLIP17.67■□□□□ 0.42
SAMM50-201ENST00000350028 KCTD19Q17RG1 926 aaPredicted RBP17.67■□□□□ 0.42
SAMM50-201ENST00000350028 KCTD16Q68DU8 428 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 SLC4A11Q8NBS3 891 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 HERPUD2Q9BSE4 406 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 SMYD3Q9H7B4 428 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 CHST7Q9NS84 486 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 DPP3Q9NY33 737 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 DDX56Q9NY93 547 aaKnown RBP17.67■□□□□ 0.42
SAMM50-201ENST00000350028 CPA4Q9UI42 421 aa17.67■□□□□ 0.42
SAMM50-201ENST00000350028 SMIM35A0A1B0GVV1 85 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 SIGLEC16A6NMB1 481 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 O00370 1275 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 GAS8O95995 478 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 IVLP07476 585 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 VDRP11473 427 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 ITIH2P19823 946 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 COPS2P61201 443 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 KRT17Q04695 432 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 SNX1Q13596 522 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 PTK6Q13882 451 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 LLGL1Q15334 1064 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 ZSCAN26Q16670 478 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 DAB2IPQ5VWQ8 1189 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 SH2D3CQ8N5H7 860 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 ELOVL4Q9GZR5 314 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 PABPC3Q9H361 631 aaKnown RBP17.66■□□□□ 0.42
SAMM50-201ENST00000350028 CALCOCO1Q9P1Z2 691 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 KIAA1257Q9ULG3 409 aa17.66■□□□□ 0.42
SAMM50-201ENST00000350028 GNEQ9Y223 722 aaKnown RBP17.66■□□□□ 0.42
SAMM50-201ENST00000350028 ADCY6O43306 1168 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 F2P00734 622 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 NUDT17P0C025 328 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 SMIM10L2AP0DMW4 78 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 SMIM10L2BP0DMW5 78 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 ZNF252P-AS1Q0IIN9 211 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 NFX1Q12986 1120 aaKnown RBP17.65■□□□□ 0.42
SAMM50-201ENST00000350028 ZNF268Q14587 947 aaPredicted RBP17.65■□□□□ 0.42
SAMM50-201ENST00000350028 CNGA2Q16280 664 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 PTPN20Q4JDL3 420 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 ARFGAP2Q8N6H7 521 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 OR2W6PQ8NHA6 318 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 KIF12Q96FN5 646 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 HEMGNQ9BXL5 484 aa17.65■□□□□ 0.42
SAMM50-201ENST00000350028 NPTXRO95502 500 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 HMGCRP04035 888 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 NR1D1P20393 614 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 PTPN7P35236 360 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 GJC1P36383 396 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 IRAK1P51617 712 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 OGDHQ02218 1023 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 CAV1Q03135 178 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 INCA1Q0VD86 236 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 KIZQ2M2Z5 673 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 CYP4A22Q5TCH4 519 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 SLC27A1Q6PCB7 646 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 LRRC31Q6UY01 552 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 CATSPER4Q7RTX7 472 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 FNIP1Q8TF40 1166 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 RNF25Q96BH1 459 aaPredicted RBP17.64■□□□□ 0.41
SAMM50-201ENST00000350028 SLITRK1Q96PX8 696 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 TWNKQ96RR1 684 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 CWC15Q9P013 229 aaKnown RBP17.64■□□□□ 0.41
SAMM50-201ENST00000350028 BARX2Q9UMQ3 279 aaPredicted RBP17.64■□□□□ 0.41
SAMM50-201ENST00000350028 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.64■□□□□ 0.41
SAMM50-201ENST00000350028 CITO14578 2027 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 MBLAC1A4D2B0 266 aaPredicted RBP17.64■□□□□ 0.41
SAMM50-201ENST00000350028 F8VP50 259 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 GPR32O75388 356 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 TOMM70O94826 608 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 MICAL2O94851 1124 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 KRT1P04264 644 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 KRT3P12035 628 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 RARGP13631 454 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 HNRNPH2P55795 449 aaKnown RBP17.64■□□□□ 0.41
SAMM50-201ENST00000350028 PSMC1P62191 440 aaKnown RBP17.64■□□□□ 0.41
SAMM50-201ENST00000350028 LMNB2Q03252 620 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 IFFO1Q0D2I5 559 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 MYO1EQ12965 1108 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 PRAMEF19Q5SWL8 479 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 DENND2CQ68D51 928 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 CROCCP2Q86T23 111 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 ATG4AQ8WYN0 398 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 SNF8Q96H20 258 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 FAM49AQ9H0Q0 323 aaPredicted RBP17.64■□□□□ 0.41
SAMM50-201ENST00000350028 TSPYL1Q9H0U9 437 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 ASIC3Q9UHC3 531 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 CYTH4Q9UIA0 394 aa17.64■□□□□ 0.41
SAMM50-201ENST00000350028 R3HDM2Q9Y2K5 976 aaKnown RBP17.64■□□□□ 0.41
SAMM50-201ENST00000350028 MANSC4A6NHS7 340 aaPredicted RBP17.63■□□□□ 0.41
SAMM50-201ENST00000350028 GOLGA8SH3BPF8 625 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms