RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 FUT2Q10981 343 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 FXNQ16595 210 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 ARL6IP4Q66PJ3 421 aaKnown RBP11.19□□□□□ -0.62
CAPN3-203ENST00000349748 NANOGP8Q6NSW7 305 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 LVRNQ6Q4G3 990 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 LPCAT2Q7L5N7 544 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 ZNF804AQ7Z570 1209 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-203ENST00000349748 MAML1Q92585 1016 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 ISCA1Q9BUE6 129 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 SPZ1Q9BXG8 430 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 SMYD3Q9H7B4 428 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 PCDHGA3Q9Y5H0 932 aa11.19□□□□□ -0.62
CAPN3-203ENST00000349748 BAZ2BQ9UIF8 2168 aaKnown RBP11.18□□□□□ -0.62
CAPN3-203ENST00000349748 CCDC162PA2VCL2 907 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 PPARGP37231 505 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-203ENST00000349748 ZNF200P98182 395 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-203ENST00000349748 PKN2Q16513 984 aaKnown RBP11.18□□□□□ -0.62
CAPN3-203ENST00000349748 CYP4F22Q6NT55 531 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 TRABD2AQ86V40 505 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 AMIGO3Q86WK7 504 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 SLC39A3Q9BRY0 314 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 ZNF287Q9HBT7 754 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
CAPN3-203ENST00000349748 PLA2G4CQ9UP65 541 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 SSX2IPQ9Y2D8 614 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 NR2E3Q9Y5X4 410 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 ITGB4P16144 1822 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 THSD7AQ9UPZ6 1657 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 NID2Q14112 1375 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 TRAF5O00463 557 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 DNAJA2O60884 412 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 KRT15P19012 456 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 SLC9A1P19634 815 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 IL6STP40189 918 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-203ENST00000349748 SNAPC2Q13487 334 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 PDK1Q15118 436 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 EGFLAMQ63HQ2 1017 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 CCSAPQ6IQ19 270 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-203ENST00000349748 VPS36Q86VN1 386 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 TMPRSS6Q8IU80 811 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 CCSER1Q9C0I3 900 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 CCDC68Q9H2F9 335 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 GPAMQ9HCL2 828 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 RIC8AQ9NPQ8 531 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 POU2F3Q9UKI9 436 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 INPP5FQ9Y2H2 1132 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 ZNF532Q9HCE3 1301 aa11.18□□□□□ -0.62
CAPN3-203ENST00000349748 POC1B-GALNT4F8VUJ3 575 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 AQP9O43315 295 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 SRGAP2CP0DJJ0 459 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 SRGAP2BP0DMP2 458 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 ALAS1P13196 640 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 ADRA1DP25100 572 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 COILP38432 576 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-203ENST00000349748 HSD17B4P51659 736 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 CDK16Q00536 496 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 RASGRF1Q13972 1273 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 DHRS4L2Q6PKH6 230 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 RSPH3Q86UC2 560 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 MARVELD2Q8N4S9 558 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 SRBD1Q8N5C6 995 aaKnown RBP11.17□□□□□ -0.62
CAPN3-203ENST00000349748 CXorf38Q8TB03 319 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 CCDC124Q96CT7 223 aaKnown RBP11.17□□□□□ -0.62
CAPN3-203ENST00000349748 PLEKHA8Q96JA3 519 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 C7orf25Q9BPX7 421 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 SNX25Q9H3E2 840 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 KCNK13Q9HB14 408 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 XAB2Q9HCS7 855 aaKnown RBP11.17□□□□□ -0.62
CAPN3-203ENST00000349748 GIN1Q9NXP7 522 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 SCHIP1Q9P0W5 487 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-203ENST00000349748 ASIC3Q9UHC3 531 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 COL4A3BPQ9Y5P4 624 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 FAM205AQ6ZU69 1335 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 A0A088AWK7 358 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 A0A1W2PPM1 405 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 ARHGAP42A6NI28 874 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 SMIM22K7EJ46 135 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 XPO1O14980 1071 aaKnown RBP11.17□□□□□ -0.62
CAPN3-203ENST00000349748 TEX28O15482 410 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 GUCY1B2O75343 617 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 FKBP6O75344 327 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 CAMTA2O94983 1202 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 SERPINB6P35237 376 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 ZBTB17Q13105 803 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 WDR45BQ5MNZ6 344 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 DEFB132Q7Z7B7 95 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 CCDC24Q8N4L8 307 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 HELQQ8TDG4 1101 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 ARHGEF26Q96DR7 871 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 TRIM55Q9BYV6 548 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 PARVBQ9HBI1 364 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 OLFML3Q9NRN5 406 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 THEGQ9P2T0 379 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 MTUS1Q9ULD2 1270 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 ACTL7BQ9Y614 415 aa11.17□□□□□ -0.62
CAPN3-203ENST00000349748 J3QRK9 145 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 PRKAB2O43741 272 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 NR4A1P22736 598 aa11.16□□□□□ -0.62
CAPN3-203ENST00000349748 CTNNA2P26232 953 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms