RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 PODXLO00592 558 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 CYB561D2O14569 222 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 HUS1O60921 280 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 POMCP01189 267 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 MYBL1P10243 752 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 CD19P15391 556 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 WARSP23381 471 aaKnown RBP11.67□□□□□ -0.54
ECM1-201ENST00000346569 PAX3P23760 479 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 LMO2P25791 158 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 GNL1P36915 607 aaPredicted RBP11.67□□□□□ -0.54
ECM1-201ENST00000346569 GPD2P43304 727 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 ORC1Q13415 861 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 TUSC3Q13454 348 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 SGO2Q562F6 1265 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 CLLU1OSQ5K130 101 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 PLEKHA7Q6IQ23 1121 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 DENND1BQ6P3S1 775 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 LCLAT1Q6UWP7 414 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 PASD1Q8IV76 773 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 C3orf58Q8NDZ4 430 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 SCLYQ96I15 445 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 PAAF1Q9BRP4 392 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 UVRAGQ9P2Y5 699 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 CACNG4Q9UBN1 327 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 CNOT8Q9UFF9 292 aaKnown RBP11.67□□□□□ -0.54
ECM1-201ENST00000346569 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.67□□□□□ -0.54
ECM1-201ENST00000346569 SAR1BQ9Y6B6 198 aa11.67□□□□□ -0.54
ECM1-201ENST00000346569 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.66□□□□□ -0.54
ECM1-201ENST00000346569 TCRBV5S1A1TA0A578 114 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 FAM170AA1A519 330 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 BUB1BO60566 1050 aaPredicted RBP11.66□□□□□ -0.54
ECM1-201ENST00000346569 DDHD2O94830 711 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 CYP2C18P33260 490 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 GTF2F1P35269 517 aaKnown RBP eCLIP11.66□□□□□ -0.54
ECM1-201ENST00000346569 NSFP46459 744 aaKnown RBP11.66□□□□□ -0.54
ECM1-201ENST00000346569 CCL23P55773 120 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 DSC1Q08554 894 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 STILQ15468 1287 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 LRRC26Q2I0M4 334 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 PKDCCQ504Y2 493 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 NOMO2Q5JPE7 1267 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 ARHGAP17Q68EM7 881 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 DCLRE1AQ6PJP8 1040 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 ACOT1Q86TX2 421 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 NT5DC3Q86UY8 548 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 OSTM1Q86WC4 334 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 PDCL2Q8N4E4 241 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 C12orf29Q8N999 325 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 APPL2Q8NEU8 664 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 OR6B3Q8NGW1 331 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 UBE2Q2Q8WVN8 375 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 ZNF653Q96CK0 615 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 TRIM11Q96F44 468 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 UROC1Q96N76 676 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 C11orf49Q9H6J7 331 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 ADAM22Q9P0K1 906 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 CTTNBP2NLQ9P2B4 639 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 KANSL3Q9P2N6 904 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 CHORDC1Q9UHD1 332 aaPredicted RBP11.66□□□□□ -0.54
ECM1-201ENST00000346569 CYTH4Q9UIA0 394 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 SNX12Q9UMY4 172 aa11.66□□□□□ -0.54
ECM1-201ENST00000346569 TET1Q8NFU7 2136 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 RANBP2P49792 3224 aaKnown RBP11.65□□□□□ -0.54
ECM1-201ENST00000346569 CASTOR2A6NHX0 329 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 A8MXQ7 604 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 MICAL2O94851 1124 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 SLU7O95391 586 aaKnown RBP11.65□□□□□ -0.54
ECM1-201ENST00000346569 FTCDO95954 541 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 PFKMP08237 780 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 RRM1P23921 792 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 GABRB2P47870 512 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 TIGD5Q53EQ6 642 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 PPP1R26Q5T8A7 1209 aaPredicted RBP11.65□□□□□ -0.54
ECM1-201ENST00000346569 WSCD1Q658N2 575 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 GLB1LQ6UWU2 654 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 ZNF280BQ86YH2 543 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 SYCE1Q8N0S2 351 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 TMEM86AQ8N2M4 240 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 C1orf131Q8NDD1 294 aaKnown RBP11.65□□□□□ -0.54
ECM1-201ENST00000346569 CASD1Q96PB1 797 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 NUP85Q9BW27 656 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 ATP11BQ9Y2G3 1177 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 ALG6Q9Y672 507 aa11.65□□□□□ -0.54
ECM1-201ENST00000346569 M0QZQ0 153 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 CTIFO43310 598 aaKnown RBP11.64□□□□□ -0.55
ECM1-201ENST00000346569 ATMINO43313 823 aaPredicted RBP11.64□□□□□ -0.55
ECM1-201ENST00000346569 HCRTO43612 131 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 NCK2O43639 380 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 B4GALT3O60512 393 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 SRGAP2O75044 1071 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 CYP11A1P05108 521 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 CALB1P05937 261 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 CLTBP09497 229 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 PDGFRBP09619 1106 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 MAMLD1Q13495 774 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 C2CD6Q53TS8 623 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 LIN9Q5TKA1 542 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 C11orf63Q6NUN7 778 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 LLGL2Q6P1M3 1020 aa11.64□□□□□ -0.55
ECM1-201ENST00000346569 MMS22LQ6ZRQ5 1243 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms