RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ALG13Q9NP73 1137 aaKnown RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 KIF3CO14782 793 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 DYRK3O43781 588 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 TOMM70O94826 608 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 HMGCRP04035 888 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 MYBL1P10243 752 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 MYL4P12829 197 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 RPA1P27694 616 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 ETFBP38117 255 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 NBPF9Q3BBW0 867 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 RABGAP1LQ5R372 815 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 SZRD1Q7Z422 152 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 CHSY1Q86X52 802 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 CDKL3Q8IVW4 592 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 CFAP61Q8NHU2 1237 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 CATSPERBQ9H7T0 1116 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 UTP6Q9NYH9 597 aaKnown RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 A0A0G2JND7 137 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 F5H423 210 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 SLC9A3R1O14745 358 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 CHUKO15111 745 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 SYF2O95926 243 aaKnown RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 TPI1P60174 286 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 FSCN1Q16658 493 aaKnown RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 MIIPQ5JXC2 388 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 HERC6Q8IVU3 1022 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 SLC7A14Q8TBB6 771 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 C18orf8Q96DM3 657 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 C9orf72Q96LT7 481 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 DCTN4Q9UJW0 460 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 TGFB3P10600 412 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 GNA15P30679 374 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 GRK4P32298 578 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 FUT2Q10981 343 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 GIT2Q14161 759 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 SLC29A2Q14542 456 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 SGSM1Q2NKQ1 1148 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 EPM2AIP1Q7L775 607 aaPredicted RBP11.4□□□□□ -0.58
CLCN6-202ENST00000346436 FGD4Q96M96 766 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 EGFL8Q99944 293 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 ECT2Q9H8V3 914 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 CD248Q9HCU0 757 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 VCX3AQ9NNX9 186 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.4□□□□□ -0.58
CLCN6-202ENST00000346436 WDR35Q9P2L0 1181 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 SLC16A3O15427 465 aaKnown RBP11.4□□□□□ -0.58
CLCN6-202ENST00000346436 SMARCA1P28370 1054 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 WDR72Q3MJ13 1102 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 OSCP1Q8WVF1 389 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 TMEM143Q96AN5 459 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 ZNF558Q96NG5 402 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 UBE2OQ9C0C9 1292 aaKnown RBP11.4□□□□□ -0.58
CLCN6-202ENST00000346436 SCUBE2Q9NQ36 999 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 SENP1Q9P0U3 644 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 H0Y626 953 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 B3GAT3O94766 335 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 HMBSP08397 361 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 SNRPFP62306 86 aaKnown RBP11.4□□□□□ -0.58
CLCN6-202ENST00000346436 RPS6P62753 249 aaKnown RBP11.4□□□□□ -0.58
CLCN6-202ENST00000346436 FIGNQ5HY92 759 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 RGL4Q8IZJ4 473 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 SEZ6LQ9BYH1 1024 aa11.4□□□□□ -0.58
CLCN6-202ENST00000346436 ABI2Q9NYB9 513 aaPredicted RBP11.4□□□□□ -0.58
CLCN6-202ENST00000346436 FAM187AA6NFU0 413 aa11.4□□□□□ -0.59
CLCN6-202ENST00000346436 FOXN3O00409 490 aaPredicted RBP11.4□□□□□ -0.59
CLCN6-202ENST00000346436 ZBTB39O15060 712 aa11.4□□□□□ -0.59
CLCN6-202ENST00000346436 LZTS3O60299 673 aaPredicted RBP11.4□□□□□ -0.59
CLCN6-202ENST00000346436 YWHAHQ04917 246 aaPredicted RBP11.4□□□□□ -0.59
CLCN6-202ENST00000346436 ANKRD23Q86SG2 305 aa11.4□□□□□ -0.59
CLCN6-202ENST00000346436 IRF2BP1Q8IU81 584 aa11.4□□□□□ -0.59
CLCN6-202ENST00000346436 PYROXD1Q8WU10 500 aa11.4□□□□□ -0.59
CLCN6-202ENST00000346436 C1QTNF7Q9BXJ2 289 aa11.4□□□□□ -0.59
CLCN6-202ENST00000346436 FTHL17Q9BXU8 183 aa11.4□□□□□ -0.59
CLCN6-202ENST00000346436 PCSK1NQ9UHG2 260 aa11.4□□□□□ -0.59
CLCN6-202ENST00000346436 MRPS17Q9Y2R5 130 aaKnown RBP11.4□□□□□ -0.59
CLCN6-202ENST00000346436 AFDNP55196 1824 aaKnown RBP11.4□□□□□ -0.59
CLCN6-202ENST00000346436 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-202ENST00000346436 LCP1P13796 627 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 HNRNPH1P31943 449 aaKnown RBP11.39□□□□□ -0.59
CLCN6-202ENST00000346436 ERVK-9P63128 1117 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 ZNF177Q13360 481 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-202ENST00000346436 AAK1Q2M2I8 961 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 TRIM67Q6ZTA4 783 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 PDIK1LQ8N165 341 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 FBXO22Q8NEZ5 403 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 TTC8Q8TAM2 541 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 SLC30A1Q9Y6M5 507 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 SPACA6W5XKT8 324 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 TLL1O43897 1013 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 MX2P20592 715 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 PBX1P40424 430 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 GPS1Q13098 491 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 MEA1Q16626 185 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 FAM102AQ5T9C2 384 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-202ENST00000346436 ADCK2Q7Z695 626 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 SYT2Q8N9I0 419 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-202ENST00000346436 SPATA20Q8TB22 786 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 TTC17Q96AE7 1141 aa11.39□□□□□ -0.59
CLCN6-202ENST00000346436 VPS50Q96JG6 964 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms