RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CXCL17Q6UXB2 119 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 DSTYKQ6XUX3 929 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 TMC3Q7Z5M5 1100 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 USP33Q8TEY7 942 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 L3MBTL3Q96JM7 780 aaPredicted RBP14.03□□□□□ -0.16
CASC4-202ENST00000345795 PPP1R36Q96LQ0 422 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 RAB6BQ9NRW1 208 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 FGFR1OP2Q9NVK5 253 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 TXNDC16Q9P2K2 825 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 SCINQ9Y6U3 715 aa14.03□□□□□ -0.16
CASC4-202ENST00000345795 HBP1O60381 514 aa14.02□□□□□ -0.16
CASC4-202ENST00000345795 SRGAP2BP0DMP2 458 aa14.02□□□□□ -0.16
CASC4-202ENST00000345795 MDH1P40925 334 aaKnown RBP14.02□□□□□ -0.16
CASC4-202ENST00000345795 EIF3EP60228 445 aaKnown RBP14.02□□□□□ -0.16
CASC4-202ENST00000345795 MXRA7P84157 204 aa14.02□□□□□ -0.16
CASC4-202ENST00000345795 ACTN3Q08043 901 aaPredicted RBP14.02□□□□□ -0.16
CASC4-202ENST00000345795 KIF2BQ8N4N8 673 aa14.02□□□□□ -0.16
CASC4-202ENST00000345795 ZFP42Q96MM3 310 aa14.02□□□□□ -0.16
CASC4-202ENST00000345795 CGRRF1Q99675 332 aa14.02□□□□□ -0.16
CASC4-202ENST00000345795 UNKQ9C0B0 810 aaKnown RBP14.02□□□□□ -0.16
CASC4-202ENST00000345795 HAPLN2Q9GZV7 340 aa14.02□□□□□ -0.16
CASC4-202ENST00000345795 UVRAGQ9P2Y5 699 aa14.02□□□□□ -0.16
CASC4-202ENST00000345795 EIF3HO15372 352 aaKnown RBP eCLIP14.02□□□□□ -0.176e-8■□□□□ 9.5
CASC4-202ENST00000345795 PRLRP16471 622 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 OTUD4Q01804 1114 aaKnown RBP14.02□□□□□ -0.17
CASC4-202ENST00000345795 ADCY2Q08462 1091 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 KIF22Q14807 665 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 DCAF6Q58WW2 860 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 TAOK1Q7L7X3 1001 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 GLIS1Q8NBF1 620 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 BHMTQ93088 406 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 HES6Q96HZ4 224 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 GPR88Q9GZN0 384 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 NXF3Q9H4D5 531 aaKnown RBP14.02□□□□□ -0.17
CASC4-202ENST00000345795 DPP3Q9NY33 737 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 FEZ2Q9UHY8 353 aaPredicted RBP14.02□□□□□ -0.17
CASC4-202ENST00000345795 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.02□□□□□ -0.17
CASC4-202ENST00000345795 NEU2Q9Y3R4 380 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 E5RJQ4 531 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 ARF4P18085 180 aaPredicted RBP14.02□□□□□ -0.17
CASC4-202ENST00000345795 SSTR1P30872 391 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 ABCG1P45844 678 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 ATXN1P54253 815 aaKnown RBP14.02□□□□□ -0.17
CASC4-202ENST00000345795 SESN3P58005 492 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 OVGP1Q12889 678 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 CELF3Q5SZQ8 465 aaKnown RBP14.02□□□□□ -0.17
CASC4-202ENST00000345795 HACE1Q8IYU2 909 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 STKLD1Q8NE28 680 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 P3H4Q92791 437 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 GPR20Q99678 358 aa14.02□□□□□ -0.17
CASC4-202ENST00000345795 HMGB1P1B2RPK0 211 aaPredicted RBP14.01□□□□□ -0.17
CASC4-202ENST00000345795 TULP2O00295 520 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 PODXLO00592 558 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 VNN1O95497 513 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 SDC4P31431 198 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 ARL1P40616 181 aaPredicted RBP14.01□□□□□ -0.17
CASC4-202ENST00000345795 PTENP60484 403 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 ITKQ08881 620 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 MDH1BQ5I0G3 518 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 EFCAB13Q8IY85 973 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 GRK7Q8WTQ7 553 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 UBP1Q9NZI7 540 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 TMEM120BA0PK00 339 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 BTBD19C9JJ37 291 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 CLDN5O00501 218 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 CITO14578 2027 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 PPEF2O14830 753 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 DDX3YO15523 660 aaKnown RBP14.01□□□□□ -0.17
CASC4-202ENST00000345795 POMCP01189 267 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 CRADDP78560 199 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 MAMLD1Q13495 774 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 GRIK4Q16099 956 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 CCL14Q16627 93 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 RIOX2Q8IUF8 465 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 IP6K2Q9UHH9 426 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 NOCTQ9UK39 431 aaKnown RBP14.01□□□□□ -0.17
CASC4-202ENST00000345795 TSPAN16Q9UKR8 245 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 INTUQ9ULD6 942 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 PRG3Q9Y2Y8 225 aaPredicted RBP14.01□□□□□ -0.17
CASC4-202ENST00000345795 ASB14A6NK59 587 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 AP1B1Q10567 949 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 RAB6CQ53S08 254 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 DNAAF3Q8N9W5 541 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 EDEM1Q92611 657 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 BORCS6Q96GS4 357 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 SNF8Q96H20 258 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 TWNKQ96RR1 684 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 JPH2Q9BR39 696 aaPredicted RBP14.01□□□□□ -0.17
CASC4-202ENST00000345795 RAB6CQ9H0N0 254 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 GBA2Q9HCG7 927 aaPredicted RBP14.01□□□□□ -0.17
CASC4-202ENST00000345795 ARHGAP28Q9P2N2 729 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 FIS1Q9Y3D6 152 aa14.01□□□□□ -0.17
CASC4-202ENST00000345795 AVILO75366 819 aa14□□□□□ -0.17
CASC4-202ENST00000345795 FASTKD3Q14CZ7 662 aaKnown RBP14□□□□□ -0.17
CASC4-202ENST00000345795 PSMD6Q15008 389 aa14□□□□□ -0.17
CASC4-202ENST00000345795 C11orf63Q6NUN7 778 aa14□□□□□ -0.17
CASC4-202ENST00000345795 HIBCHQ6NVY1 386 aaPredicted RBP14□□□□□ -0.17
CASC4-202ENST00000345795 ATL2Q8NHH9 583 aa14□□□□□ -0.17
CASC4-202ENST00000345795 ZNF473Q8WTR7 871 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms