RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 CRKP46108 304 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 RUNX1T1Q06455 604 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 PPIDQ08752 370 aaKnown RBP18.21■□□□□ 0.51
SPAST-202ENST00000345662 KBTBD12Q3ZCT8 623 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 RC3H1Q5TC82 1133 aaKnown RBP18.21■□□□□ 0.51
SPAST-202ENST00000345662 TSPAN17Q96FV3 270 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 SARS2Q9NP81 518 aaKnown RBP18.21■□□□□ 0.51
SPAST-202ENST00000345662 C3orf70A6NLC5 250 aaPredicted RBP18.21■□□□□ 0.51
SPAST-202ENST00000345662 NFIBO00712 420 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 CIITAP33076 1130 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 DDR1Q08345 913 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 NCOA4Q13772 614 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 STXBP2Q15833 593 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 CCDC103Q8IW40 242 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 RNF217Q8TC41 542 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 NSUN6Q8TEA1 469 aaKnown RBP18.21■□□□□ 0.51
SPAST-202ENST00000345662 ZFRQ96KR1 1074 aaKnown RBP18.21■□□□□ 0.51
SPAST-202ENST00000345662 ZNF408Q9H9D4 720 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 SNX13Q9Y5W8 968 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 E2F8A0AVK6 867 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 USP1O94782 785 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 PSMA4P25789 261 aaKnown RBP18.21■□□□□ 0.51
SPAST-202ENST00000345662 PLEKHA7Q6IQ23 1121 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 LPCAT2Q7L5N7 544 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 CATSPER4Q7RTX7 472 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 BEST2Q8NFU1 509 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 BRD8Q9H0E9 1235 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 SAR1AQ9NR31 198 aa18.21■□□□□ 0.51
SPAST-202ENST00000345662 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 UBA6A0AVT1 1052 aaPredicted RBP18.2■□□□□ 0.5
SPAST-202ENST00000345662 WDR72Q3MJ13 1102 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 PTPRN2Q92932 1015 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 EGFL8Q99944 293 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 FRMD8P1Q9BZ68 369 aaPredicted RBP18.2■□□□□ 0.5
SPAST-202ENST00000345662 USP31Q70CQ4 1352 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 DLGAP3O95886 979 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 GZMAP12544 262 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 MLH1P40692 756 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 ROR2Q01974 943 aaKnown RBP18.2■□□□□ 0.5
SPAST-202ENST00000345662 EPC2Q52LR7 807 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 RAVER2Q9HCJ3 691 aaKnown RBP18.2■□□□□ 0.5
SPAST-202ENST00000345662 ZNF839A8K0R7 811 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 CSF1RP07333 972 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 GYS1P13807 737 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 CYP11B2P19099 503 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 SMTNL2Q2TAL5 461 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 HORMAD1Q86X24 394 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 TPST1O60507 370 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 BGNP21810 368 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 SERPINB5P36952 375 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 ILDR1Q86SU0 546 aaPredicted RBP18.2■□□□□ 0.5
SPAST-202ENST00000345662 MREGQ8N565 214 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 DDX18Q9NVP1 670 aaKnown RBP18.2■□□□□ 0.5
SPAST-202ENST00000345662 AXIN2Q9Y2T1 843 aa18.2■□□□□ 0.5
SPAST-202ENST00000345662 HLA-DRAP01903 254 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 APOA4P06727 396 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 ACOT2P49753 483 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 SPOUT1Q5T280 376 aaKnown RBP18.19■□□□□ 0.5
SPAST-202ENST00000345662 AGPAT3Q9NRZ7 376 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 SRP68Q9UHB9 627 aaKnown RBP18.19■□□□□ 0.5
SPAST-202ENST00000345662 DCDC2Q9UHG0 476 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 LMTK3Q96Q04 1460 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 SNX3O60493 162 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 ADORA2BP29275 332 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 VPS50Q96JG6 964 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 ELMO2Q96JJ3 720 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 RNF17Q9BXT8 1623 aaKnown RBP18.19■□□□□ 0.5
SPAST-202ENST00000345662 PDE2AO00408 941 aaPredicted RBP18.19■□□□□ 0.5
SPAST-202ENST00000345662 PSMD3O43242 534 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 TNFAIP8O95379 198 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 HMOX2P30519 316 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 NTRK3Q16288 839 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 COBLL1Q53SF7 1204 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 C11orf63Q6NUN7 778 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 FBXL16Q8N461 479 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 FLAD1Q8NFF5 587 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 ARHGEF1Q92888 912 aaKnown RBP18.19■□□□□ 0.5
SPAST-202ENST00000345662 WNK4Q96J92 1243 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 IL1RL2Q9HB29 575 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 SYBUQ9NX95 663 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 DNAJC16Q9Y2G8 782 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 CBX6O95503 412 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 TPP2P29144 1249 aaPredicted RBP18.19■□□□□ 0.5
SPAST-202ENST00000345662 OTUD4Q01804 1114 aaKnown RBP18.19■□□□□ 0.5
SPAST-202ENST00000345662 GDPD5Q8WTR4 605 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
SPAST-202ENST00000345662 RPL21P46778 160 aaKnown RBP18.18■□□□□ 0.5
SPAST-202ENST00000345662 ADARP55265 1226 aaKnown RBP18.18■□□□□ 0.5
SPAST-202ENST00000345662 CCNG2Q16589 344 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 SGSM1Q2NKQ1 1148 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 ZNF483Q8TF39 744 aaPredicted RBP18.18■□□□□ 0.5
SPAST-202ENST00000345662 SCFD1Q8WVM8 642 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 ARHGEF38Q9NXL2 777 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 CORO1CQ9ULV4 474 aaPredicted RBP18.18■□□□□ 0.5
SPAST-202ENST00000345662 FCHO1O14526 889 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 EFNA5P52803 228 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 KRR1Q13601 381 aaKnown RBP18.18■□□□□ 0.5
SPAST-202ENST00000345662 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 LRRC10BA6NIK2 292 aa18.18■□□□□ 0.5
SPAST-202ENST00000345662 DGAT1O75907 488 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms