RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 AFF4Q9UHB7 1163 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 COQ4Q9Y3A0 265 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 KCNJ18B7U540 433 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 RFPL2O75678 378 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 C8AP07357 584 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 LMO2P25791 158 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 KCNJ12Q14500 433 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 PPM1LQ5SGD2 360 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 CCDC149Q6ZUS6 474 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 LIMS2Q7Z4I7 341 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 SLC7A14Q8TBB6 771 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 APOBEC3GQ9HC16 384 aaKnown RBP22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 CCDC195A0A1B0GUA6 201 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 PES1O00541 588 aaKnown RBP22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 P4HA2O15460 535 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 HCRTO43612 131 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 WEE2P0C1S8 567 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 FAM163BP0C2L3 166 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 SMRP1Q8NCR6 262 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 NIF3L1Q9GZT8 377 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 FANCLQ9NW38 375 aa22.26■■□□□ 1.15
SMARCB1-202ENST00000344921 UNC80Q8N2C7 3258 aa22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 A8MXQ7 604 aa22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 KCNQ1P51787 676 aa22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 ITIH3Q06033 890 aa22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 LRMPQ12912 555 aa22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 MAN2A1Q16706 1144 aa22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 UVSSAQ2YD98 709 aa22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 PTCRAQ6ISU1 281 aaPredicted RBP22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 AOPEPQ8N6M6 819 aa22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 TUBGCP2Q9BSJ2 902 aa22.25■■□□□ 1.15
SMARCB1-202ENST00000344921 ZMYND10O75800 440 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 ASPAP45381 313 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 ZNF165P49910 485 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 PSMC1P62191 440 aaKnown RBP22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 PUS10Q3MIT2 529 aaKnown RBP22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 TCP11X2Q5H9J9 407 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 INTS6LQ5JSJ4 861 aaKnown RBP22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 LRRTM3Q86VH5 581 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 SYT15Q9BQS2 421 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 FUCA2Q9BTY2 467 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 SDCBP2Q9H190 292 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 S1PR5Q9H228 398 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 ADAM7Q9H2U9 754 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 PIDD1Q9HB75 910 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 ZDHHC7Q9NXF8 308 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 GTF3C4Q9UKN8 822 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 CDH9Q9ULB4 789 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 FAM50BQ9Y247 325 aa22.24■■□□□ 1.15
SMARCB1-202ENST00000344921 MTMR11A4FU01 709 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 PMM2O15305 246 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 MBTPS2O43462 519 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 SEC24AO95486 1093 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 LRG1P02750 347 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 CDK11BP21127 795 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 EEF1GP26641 437 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 DUSP4Q13115 394 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 SMAD4Q13485 552 aaKnown RBP22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 TCEAL8Q8IYN2 117 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 ATAD1Q8NBU5 361 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 TATDN2Q93075 761 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 ABI2Q9NYB9 513 aaPredicted RBP22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 MAFFQ9ULX9 164 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 ATP2C2O75185 946 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 TPM2P07951 284 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 CD58P19256 250 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 SMARCB1Q12824 385 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 NFE2Q16621 373 aaPredicted RBP22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 ANKRD20A12PQ8NF67 263 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 ASB2Q96Q27 587 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 BCO2Q9BYV7 579 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 CYP3A43Q9HB55 503 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 SLC27A5Q9Y2P5 690 aa22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 USP15Q9Y4E8 981 aaPredicted RBP22.23■■□□□ 1.15
SMARCB1-202ENST00000344921 SMTNL1A8MU46 457 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 BECN2A8MW95 431 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 CCL16O15467 120 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 VWA3BQ502W6 1294 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 ATAT1Q5SQI0 421 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 RTL10Q7L3V2 364 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 EHBP1Q8NDI1 1231 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 SMG7Q92540 1137 aaKnown RBP22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 RIPOR3Q96MK2 946 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 NT5C1BQ96P26 610 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 BPIFA3Q9BQP9 254 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 NDST4Q9H3R1 872 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 GCNT4Q9P109 453 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 CDH22Q9UJ99 828 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 PCDHB5Q9Y5E4 795 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 INSL5Q9Y5Q6 135 aa22.22■■□□□ 1.15
SMARCB1-202ENST00000344921 MYBPHLA2RUH7 354 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 GRXCR2A6NFK2 248 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 HNRNPA1P09651 372 aaKnown RBP eCLIP22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 TRIM21P19474 475 aaKnown RBP22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 MGAT5BQ3V5L5 792 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 CDKAL1Q5VV42 579 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 GPR149Q86SP6 731 aa22.21■■□□□ 1.15
SMARCB1-202ENST00000344921 SPATA2LQ8IUW3 424 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms