RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SHKBP1Q8TBC3 707 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 ZNF512Q96ME7 567 aaPredicted RBP15.53■□□□□ 0.08
HMGN3-202ENST00000344726 FOXQ1Q9C009 403 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 KIAA1586Q9HCI6 787 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 ZNF334Q9HCZ1 680 aaPredicted RBP15.53■□□□□ 0.08
HMGN3-202ENST00000344726 ZNF638Q14966 1978 aaKnown RBP15.53■□□□□ 0.08
HMGN3-202ENST00000344726 GREB1Q4ZG55 1949 aa15.53■□□□□ 0.08
HMGN3-202ENST00000344726 HCRTO43612 131 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 MICAL2O94851 1124 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 RPN1P04843 607 aaKnown RBP15.52■□□□□ 0.08
HMGN3-202ENST00000344726 DCNP07585 359 aaKnown RBP15.52■□□□□ 0.08
HMGN3-202ENST00000344726 MYL4P12829 197 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 STARD6P59095 220 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 RBP5P82980 135 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 CYP24A1Q07973 514 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 PSMD6Q15008 389 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 SURF1Q15526 300 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 TEAD2Q15562 447 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 STXBP5Q5T5C0 1151 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 PHLDB3Q6NSJ2 640 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 KRBA2Q6ZNG9 492 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 HS2ST1Q7LGA3 356 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 WDR49Q8IV35 697 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 ELMOD1Q8N336 334 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 DTWD2Q8NBA8 298 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 PLEKHO2Q8TD55 490 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 ASB16Q96NS5 453 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 DDX23Q9BUQ8 820 aaKnown RBP15.52■□□□□ 0.08
HMGN3-202ENST00000344726 KCTD10Q9H3F6 313 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 ASAH2Q9NR71 780 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 TMLHEQ9NVH6 421 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 GDAP2Q9NXN4 497 aa15.52■□□□□ 0.08
HMGN3-202ENST00000344726 MTF2Q9Y483 593 aaPredicted RBP15.52■□□□□ 0.08
HMGN3-202ENST00000344726 MIA3Q5JRA6 1907 aa15.52■□□□□ 0.07
HMGN3-202ENST00000344726 NUP210Q8TEM1 1887 aaPredicted RBP15.52■□□□□ 0.07
HMGN3-202ENST00000344726 F5P12259 2224 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 STK25O00506 426 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 ZNF202O95125 648 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 TNNC2P02585 160 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 MYL1P05976 194 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 DLATP10515 647 aaKnown RBP15.51■□□□□ 0.07
HMGN3-202ENST00000344726 ATF6P18850 670 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 DPYDQ12882 1025 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 PSMD2Q13200 908 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 GRM2Q14416 872 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 CCDC142Q17RM4 750 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 DUOXA2Q1HG44 320 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 CYP4A22Q5TCH4 519 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 IQCEQ6IPM2 695 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 TRAPPC11Q7Z392 1133 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 THEM5Q8N1Q8 247 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 ZNF516Q92618 1163 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 ELSPBP1Q96BH3 223 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 CCDC127Q96BQ5 260 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 RSPRY1Q96DX4 576 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 CGRRF1Q99675 332 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 LPIN3Q9BQK8 851 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 MKNK1Q9BUB5 465 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 CGNQ9P2M7 1197 aaKnown RBP15.51■□□□□ 0.07
HMGN3-202ENST00000344726 SNX9Q9Y5X1 595 aa15.51■□□□□ 0.07
HMGN3-202ENST00000344726 ZFHX2Q9C0A1 2572 aaPredicted RBP15.5■□□□□ 0.07
HMGN3-202ENST00000344726 A0A1W2PRU2 124 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 ZNF197O14709 1029 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 HUS1O60921 280 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 CST3P01034 146 aaPredicted RBP15.5■□□□□ 0.07
HMGN3-202ENST00000344726 CD72P21854 359 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 ACAT1P24752 427 aaKnown RBP15.5■□□□□ 0.07
HMGN3-202ENST00000344726 VIPR2P41587 438 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 ALDH1A3P47895 512 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 CASP4P49662 377 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 EPHB3P54753 998 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 PLD1Q13393 1074 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 ANGPT1Q15389 498 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 MLF2Q15773 248 aaPredicted RBP15.5■□□□□ 0.07
HMGN3-202ENST00000344726 SOWAHAQ2M3V2 549 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 SLC44A4Q53GD3 710 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 VITQ6UXI7 678 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 GAREM2Q75VX8 874 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 LIMS2Q7Z4I7 341 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 PJA1Q8NG27 643 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 HPDLQ96IR7 371 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 PKMYT1Q99640 499 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 SEPT5Q99719 369 aaPredicted RBP15.5■□□□□ 0.07
HMGN3-202ENST00000344726 DMAC2Q9NW81 257 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 DDX43Q9NXZ2 648 aaKnown RBP15.5■□□□□ 0.07
HMGN3-202ENST00000344726 HSFX1Q9UBD0 423 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 TICRRQ7Z2Z1 1910 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 ANAPC1Q9H1A4 1944 aa15.5■□□□□ 0.07
HMGN3-202ENST00000344726 PROB1E7EW31 1015 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 GABRDO14764 452 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 EXOC3O60645 756 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 RHOBTB3O94955 611 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 TNNI1P19237 187 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 NBL1P41271 181 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 NUCB2P80303 420 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 MGAT5BQ3V5L5 792 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 DNAJB7Q7Z6W7 309 aaPredicted RBP15.49■□□□□ 0.07
HMGN3-202ENST00000344726 ADGRF2Q8IZF7 708 aa15.49■□□□□ 0.07
HMGN3-202ENST00000344726 TMEM86AQ8N2M4 240 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms