RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 AP3M2P53677 418 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 CYP24A1Q07973 514 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 BFSP1Q12934 665 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 FAM78AQ5JUQ0 283 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 TMC8Q8IU68 726 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 CCDC105Q8IYK2 499 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 DEPDC1BQ8WUY9 529 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 TCEAL4Q96EI5 215 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 HPDLQ96IR7 371 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 TMEM209Q96SK2 561 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 NELL2Q99435 816 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 DDX23Q9BUQ8 820 aaKnown RBP21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 TBC1D17Q9HA65 648 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 L1RE1Q9UN81 338 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 SLC27A5Q9Y2P5 690 aa21.53■■□□□ 1.04
CEACAM3-201ENST00000344550 PDXKO00764 312 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 STAU1O95793 577 aaKnown RBP21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 HAPLN1P10915 354 aaPredicted RBP21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 NUCB2P80303 420 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 SLC44A4Q53GD3 710 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 TANGO2Q6ICL3 276 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 TRAPPC11Q7Z392 1133 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 LRRTM3Q86VH5 581 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 NELFCDQ8IXH7 590 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 HS6ST3Q8IZP7 471 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 OR5B17Q8NGF7 314 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 SHKBP1Q8TBC3 707 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 FUBP3Q96I24 572 aaKnown RBP eCLIP21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 CEP295NLQ96MC4 621 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 CGRRF1Q99675 332 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 KXD1Q9BQD3 176 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 DDX43Q9NXZ2 648 aaKnown RBP21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 CA14Q9ULX7 337 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 SIT1Q9Y3P8 196 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 SNX9Q9Y5X1 595 aa21.52■■□□□ 1.04
CEACAM3-201ENST00000344550 STK25O00506 426 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 PSMC3P17980 439 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 TNNI1P19237 187 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 FCARP24071 287 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 CASP1P29466 404 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 CDC25CP30307 473 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 MAGEA9P43362 315 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 CYP2J2P51589 502 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 MLLT6P55198 1093 aaPredicted RBP21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 STK4Q13043 487 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 MAPRE1Q15691 268 aaKnown RBP21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 MLF2Q15773 248 aaPredicted RBP21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 MGAT5BQ3V5L5 792 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 KMT5BQ4FZB7 885 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 ARHGAP15Q53QZ3 475 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 IRF7Q92985 503 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 TRMT61BQ9BVS5 477 aaKnown RBP21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 DMAC2Q9NW81 257 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 OBP2AQ9NY56 170 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 TCHHQ07283 1943 aa21.51■■□□□ 1.03
CEACAM3-201ENST00000344550 EXOC3O60645 756 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 GLULP15104 373 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 ATICP31939 592 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 NDUFA8P51970 172 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 RPL10AP62906 217 aaKnown RBP21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 CLDN10P78369 228 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 SOWAHAQ2M3V2 549 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 CFAP221Q4G0U5 840 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 INTS6LQ5JSJ4 861 aaKnown RBP21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 MFSD6LQ8IWD5 586 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 GRAMD1CQ8IYS0 662 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 ADGRF2Q8IZF7 708 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 DTWD2Q8NBA8 298 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 ZSCAN18Q8TBC5 510 aaPredicted RBP21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 SEPT5Q99719 369 aaPredicted RBP21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 PTPRJQ12913 1337 aa21.5■■□□□ 1.03
CEACAM3-201ENST00000344550 KANSL1LA0AUZ9 987 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 CLIC2O15247 247 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 PI15O43692 258 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 RHOBTB3O94955 611 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 RPN1P04843 607 aaKnown RBP21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 DLATP10515 647 aaKnown RBP21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 TEAD2Q15562 447 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 TAF12Q16514 161 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 C1orf228Q6PIY5 440 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 POTEHQ6S545 545 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 RDH13Q8NBN7 331 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 KIAA0895Q8NCT3 520 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 PJA1Q8NG27 643 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 FAM200AQ8TCP9 573 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 ZSWIM3Q96MP5 696 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 GCNAQ96QF7 691 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 PKMYT1Q99640 499 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 KCTD10Q9H3F6 313 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 ABI2Q9NYB9 513 aaPredicted RBP21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 CDH9Q9ULB4 789 aa21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 MRPS17Q9Y2R5 130 aaKnown RBP21.49■■□□□ 1.03
CEACAM3-201ENST00000344550 A0A1W2PRU2 124 aa21.48■■□□□ 1.03
CEACAM3-201ENST00000344550 PROB1E7EW31 1015 aa21.48■■□□□ 1.03
CEACAM3-201ENST00000344550 TULP1O00294 542 aaPredicted RBP21.48■■□□□ 1.03
CEACAM3-201ENST00000344550 MAPK13O15264 365 aa21.48■■□□□ 1.03
CEACAM3-201ENST00000344550 TACC1O75410 805 aa21.48■■□□□ 1.03
CEACAM3-201ENST00000344550 CSH1P0DML2 217 aa21.48■■□□□ 1.03
CEACAM3-201ENST00000344550 CSH2P0DML3 217 aa21.48■■□□□ 1.03
CEACAM3-201ENST00000344550 ATF6P18850 670 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms