RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 L3MBTL3Q96JM7 780 aaPredicted RBP25.33■■□□□ 1.65
NELFB-201ENST00000343053 CGRRF1Q99675 332 aa25.33■■□□□ 1.65
NELFB-201ENST00000343053 MAP3K20Q9NYL2 800 aaKnown RBP25.33■■□□□ 1.65
NELFB-201ENST00000343053 CNTNAP2Q9UHC6 1331 aa25.33■■□□□ 1.65
NELFB-201ENST00000343053 SUPT20HL2P0C7V6 817 aa25.33■■□□□ 1.65
NELFB-201ENST00000343053 RIPK1Q13546 671 aa25.33■■□□□ 1.65
NELFB-201ENST00000343053 SUPT20HL1Q3ZLR7 823 aa25.33■■□□□ 1.65
NELFB-201ENST00000343053 C15orf41Q9Y2V0 281 aa25.33■■□□□ 1.65
NELFB-201ENST00000343053 MKRN3Q13064 507 aaKnown RBP25.32■■□□□ 1.64
NELFB-201ENST00000343053 RCOR2Q8IZ40 523 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 AGTPBP1Q9UPW5 1226 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 hCG_1818297A0A087WSY0 165 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 CBX6O95503 412 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 TFDP1Q14186 410 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 MSS51Q4VC12 460 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 RNF43Q68DV7 783 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 FBF1Q8TES7 1133 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 TFAP2BQ92481 460 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 IMPG2Q9BZV3 1241 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 ZNF302Q9NR11 478 aa25.32■■□□□ 1.64
NELFB-201ENST00000343053 ZNF214Q9UL59 606 aaPredicted RBP25.32■■□□□ 1.64
NELFB-201ENST00000343053 UNC5CO95185 931 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 ITGBL1O95965 494 aaPredicted RBP25.31■■□□□ 1.64
NELFB-201ENST00000343053 CHRM1P11229 460 aaPredicted RBP25.31■■□□□ 1.64
NELFB-201ENST00000343053 KRT4P19013 534 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 SPARCL1Q14515 664 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 RNASEH2BQ5TBB1 312 aaKnown RBP25.31■■□□□ 1.64
NELFB-201ENST00000343053 AGBL3Q8NEM8 1001 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 ZBED3Q96IU2 234 aaPredicted RBP25.31■■□□□ 1.64
NELFB-201ENST00000343053 CYP39A1Q9NYL5 469 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 VCPP55072 806 aaKnown RBP25.31■■□□□ 1.64
NELFB-201ENST00000343053 OVGP1Q12889 678 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 LRRC8CQ8TDW0 803 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 SLC7A3Q8WY07 619 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 PORCNQ9H237 461 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 EBF2Q9HAK2 575 aa25.31■■□□□ 1.64
NELFB-201ENST00000343053 A0A0B4J269 797 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 RAP1GAPP47736 663 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 GPX6P59796 221 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 CNTN2Q02246 1040 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 LVRNQ6Q4G3 990 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 EMC1Q8N766 993 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 CEP83Q9Y592 693 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 OATP04181 439 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 ABHD2P08910 425 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 CD48P09326 243 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 RTP1P59025 263 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 CAPSQ13938 189 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 TFDP3Q5H9I0 405 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 FNBP1LQ5T0N5 605 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 HHATQ5VTY9 493 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 DENND1AQ8TEH3 1009 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 VCPIP1Q96JH7 1222 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 NPHS2Q9NP85 383 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 CISHQ9NSE2 258 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 TCRBV7S3A2A0A539 114 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 DKC1O60832 514 aaKnown RBP eCLIP25.3■■□□□ 1.64
NELFB-201ENST00000343053 TBXAS1P24557 533 aaPredicted RBP25.3■■□□□ 1.64
NELFB-201ENST00000343053 CDKN2BP42772 138 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 CTCFP49711 727 aaPredicted RBP25.3■■□□□ 1.64
NELFB-201ENST00000343053 BACE1P56817 501 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 LACTBP83111 547 aaPredicted RBP25.3■■□□□ 1.64
NELFB-201ENST00000343053 OASLQ15646 514 aaKnown RBP25.3■■□□□ 1.64
NELFB-201ENST00000343053 RHPN2Q8IUC4 686 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 RELL1Q8IUW5 271 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 MTMR14Q8NCE2 650 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 NOP53Q9NZM5 478 aaKnown RBP25.3■■□□□ 1.64
NELFB-201ENST00000343053 DCTN4Q9UJW0 460 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 ACTL7BQ9Y614 415 aa25.3■■□□□ 1.64
NELFB-201ENST00000343053 SKAP2O75563 359 aaPredicted RBP25.29■■□□□ 1.64
NELFB-201ENST00000343053 ALADP13716 330 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 ADRA1DP25100 572 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 TGFB2P61812 414 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 TFAMQ00059 246 aaKnown RBP25.29■■□□□ 1.64
NELFB-201ENST00000343053 OTUD4Q01804 1114 aaKnown RBP25.29■■□□□ 1.64
NELFB-201ENST00000343053 LMNB2Q03252 620 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 SETDB1Q15047 1291 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 EEPD1Q7L9B9 569 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 WDTC1Q8N5D0 677 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 JOSD2Q8TAC2 188 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 ACTL9Q8TC94 416 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 ZNF570Q96NI8 536 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 LRRC37BQ96QE4 947 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 LBHD1Q9BQE6 289 aaPredicted RBP25.29■■□□□ 1.64
NELFB-201ENST00000343053 PCSK1NQ9UHG2 260 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 STYXL1Q9Y6J8 313 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 CLUHO75153 1309 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 CD19P15391 556 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 MARK3P27448 753 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 RFC1P35251 1148 aaPredicted RBP25.29■■□□□ 1.64
NELFB-201ENST00000343053 HIF1AQ16665 826 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 CENPUQ71F23 418 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 RSRC1Q96IZ7 334 aaKnown RBP25.29■■□□□ 1.64
NELFB-201ENST00000343053 WRNIP1Q96S55 665 aa25.29■■□□□ 1.64
NELFB-201ENST00000343053 NXF1Q9UBU9 619 aaKnown RBP25.29■■□□□ 1.64
NELFB-201ENST00000343053 SRGAP2CP0DJJ0 459 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 IL1R2P27930 398 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 PRKG1Q13976 671 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 TAF5Q15542 800 aa25.28■■□□□ 1.64
NELFB-201ENST00000343053 REPS2Q8NFH8 660 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms