RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ZSWIM8A7E2V4 1837 aa15.56■□□□□ 0.08
PBX3-201ENST00000342287 CAPN15O75808 1086 aa15.56■□□□□ 0.08
PBX3-201ENST00000342287 H2AFZP0C0S5 128 aa15.56■□□□□ 0.08
PBX3-201ENST00000342287 NKX3-2P78367 333 aa15.56■□□□□ 0.08
PBX3-201ENST00000342287 TRIM32Q13049 653 aa15.56■□□□□ 0.08
PBX3-201ENST00000342287 H2AFVQ71UI9 128 aa15.56■□□□□ 0.08
PBX3-201ENST00000342287 MTMR12Q9C0I1 747 aa15.56■□□□□ 0.08
PBX3-201ENST00000342287 ZNF189O75820 626 aaPredicted RBP15.55■□□□□ 0.08
PBX3-201ENST00000342287 SGPL1O95470 568 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 PGK1P00558 417 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 TMEM191BP0C7N4 346 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 HOXC8P31273 242 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 HPDP32754 393 aaPredicted RBP15.55■□□□□ 0.08
PBX3-201ENST00000342287 ZNF200P98182 395 aaPredicted RBP15.55■□□□□ 0.08
PBX3-201ENST00000342287 TFAMQ00059 246 aaKnown RBP15.55■□□□□ 0.08
PBX3-201ENST00000342287 TMEM192Q8IY95 271 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 NME8Q8N427 588 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 ZFAND2BQ8WV99 257 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 ANKRD36BP1Q96IX9 119 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 ZIM3Q96PE6 472 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 CDHR5Q9HBB8 845 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 ANO9A1A5B4 782 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 CST3P01034 146 aaPredicted RBP15.55■□□□□ 0.08
PBX3-201ENST00000342287 TNNC2P02585 160 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 CXCL8P10145 99 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 DARSP14868 501 aaKnown RBP15.55■□□□□ 0.08
PBX3-201ENST00000342287 TBXAS1P24557 533 aaPredicted RBP15.55■□□□□ 0.08
PBX3-201ENST00000342287 MYBPC3Q14896 1274 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 QPCTQ16769 361 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 CATSPER4Q7RTX7 472 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 APBB1IPQ7Z5R6 666 aaPredicted RBP15.55■□□□□ 0.08
PBX3-201ENST00000342287 SLC20A1Q8WUM9 679 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 PCMTD2Q9NV79 361 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 SEPT11Q9NVA2 429 aaKnown RBP15.55■□□□□ 0.08
PBX3-201ENST00000342287 SRRDQ9UH36 339 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 CAPN6Q9Y6Q1 641 aa15.55■□□□□ 0.08
PBX3-201ENST00000342287 BUB1O43683 1085 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 CREB3O43889 395 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 KRT5P13647 590 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 FGFR4P22455 802 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 NOP14P78316 857 aaKnown RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 C2orf54Q08AI8 447 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 TRPC3Q13507 836 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 CUL2Q13617 745 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 SGSM1Q2NKQ1 1148 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 SPOPLQ6IQ16 392 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 TBC1D1Q86TI0 1168 aaPredicted RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 SLC47A2Q86VL8 602 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 CCDC63Q8NA47 563 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 EPS8L1Q8TE68 723 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 DHX38Q92620 1227 aaKnown RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 OSMRQ99650 979 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 APOBEC3GQ9HC16 384 aaKnown RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 NOCTQ9UK39 431 aaKnown RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 SAR1BQ9Y6B6 198 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 DNAJC8O75937 253 aaPredicted RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 LUC7L3O95232 432 aaKnown RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 ELNP15502 786 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 CYP11B1P15538 503 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 EIF4BP23588 611 aaKnown RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 PDE6CP51160 858 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 CCDC15Q0P6D6 951 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 PAPD7Q5XG87 772 aaKnown RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 CXCL17Q6UXB2 119 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 NOP9Q86U38 636 aaKnown RBP15.54■□□□□ 0.08
PBX3-201ENST00000342287 SEC16BQ96JE7 1060 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 ASB7Q9H672 318 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 XPNPEP3Q9NQH7 507 aa15.54■□□□□ 0.08
PBX3-201ENST00000342287 LACTBL1A8MY62 500 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 ASS1P00966 412 aaKnown RBP15.53■□□□□ 0.08
PBX3-201ENST00000342287 ATP1A1P05023 1023 aaKnown RBP15.53■□□□□ 0.08
PBX3-201ENST00000342287 PRKAR2AP13861 404 aaKnown RBP15.53■□□□□ 0.08
PBX3-201ENST00000342287 DCAF4L1Q3SXM0 396 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 ALS2CLQ60I27 953 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 CCDC70Q6NSX1 233 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 CACNA2D3Q8IZS8 1091 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 CCHCR1Q8TD31 782 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 HDAC7Q8WUI4 952 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 ACAP3Q96P50 834 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 NUB1Q9Y5A7 615 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 CCND3P30281 292 aaPredicted RBP15.53■□□□□ 0.08
PBX3-201ENST00000342287 HOXA11P31270 313 aaPredicted RBP15.53■□□□□ 0.08
PBX3-201ENST00000342287 GALCP54803 685 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 BPIFB4P59827 614 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 IFI16Q16666 785 aaKnown RBP15.53■□□□□ 0.08
PBX3-201ENST00000342287 TAF2Q6P1X5 1199 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 CD99L2Q8TCZ2 262 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 A0A0A6YYK5 440 aaPredicted RBP15.53■□□□□ 0.08
PBX3-201ENST00000342287 ADAMTS4O75173 837 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 CHRNB2P17787 502 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 MYL6P60660 151 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 SFSWAPQ12872 951 aaKnown RBP15.53■□□□□ 0.08
PBX3-201ENST00000342287 SF3A3Q12874 501 aaKnown RBP eCLIP15.53■□□□□ 0.08
PBX3-201ENST00000342287 NOTUMQ6P988 496 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 SDCCAG8Q86SQ7 713 aaPredicted RBP15.53■□□□□ 0.08
PBX3-201ENST00000342287 WDR35Q9P2L0 1181 aa15.53■□□□□ 0.08
PBX3-201ENST00000342287 GMNCA6NCL1 334 aa15.52■□□□□ 0.08
PBX3-201ENST00000342287 ZNF24P17028 368 aa15.52■□□□□ 0.08
PBX3-201ENST00000342287 AXLP30530 894 aa15.52■□□□□ 0.08
PBX3-201ENST00000342287 CRYBB1P53674 252 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms