RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 PARVAQ9NVD7 372 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 DNAJC17Q9NVM6 304 aaKnown RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 TMEM191CA6NGB0 347 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 PGK1P00558 417 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 PAXIP1Q6ZW49 1069 aaPredicted RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 MSL3Q8N5Y2 521 aaKnown RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 RUFY1Q96T51 708 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 PIN4Q9Y237 131 aaKnown RBP16.38■□□□□ 0.21
MBD1-203ENST00000339998 SNX9Q9Y5X1 595 aa16.38■□□□□ 0.21
MBD1-203ENST00000339998 GRAP2O75791 330 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 ERBB2P04626 1255 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 C6orf222P0C671 652 aaPredicted RBP16.37■□□□□ 0.21
MBD1-203ENST00000339998 PSEN2P49810 448 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 PTPN11Q06124 597 aaPredicted RBP16.37■□□□□ 0.21
MBD1-203ENST00000339998 CUL1Q13616 776 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 ZDHHC24Q6UX98 284 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 PWWP2AQ96N64 755 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 MRPL45Q9BRJ2 306 aaKnown RBP16.37■□□□□ 0.21
MBD1-203ENST00000339998 OSBPL7Q9BZF2 842 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 FAM49BQ9NUQ9 324 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 TCRBV5S1A1TA0A578 114 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 CILPO75339 1184 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 CCDC142Q17RM4 750 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 CEP85LQ5SZL2 805 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 CHADLQ6NUI6 762 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 TRIM11Q96F44 468 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 GCOM2Q9BZD3 368 aaPredicted RBP16.37■□□□□ 0.21
MBD1-203ENST00000339998 MRPL47Q9HD33 250 aaKnown RBP16.37■□□□□ 0.21
MBD1-203ENST00000339998 GRHL1Q9NZI5 618 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 GABRQQ9UN88 632 aa16.37■□□□□ 0.21
MBD1-203ENST00000339998 NRCAMQ92823 1304 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 GOLGA6CA6NDK9 693 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 MEIS3P2A8K0S8 358 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 M0QYV0 167 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 RECQL4O94761 1208 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 MICAL2O94851 1124 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 GOLGA6DP0CG33 693 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 ATF7P17544 494 aaPredicted RBP16.36■□□□□ 0.21
MBD1-203ENST00000339998 RGS7P49802 495 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 ZNF618Q5T7W0 954 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 TRIM6Q9C030 488 aaPredicted RBP16.36■□□□□ 0.21
MBD1-203ENST00000339998 ASB7Q9H672 318 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 C10orf88Q9H8K7 445 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 ZDHHC18Q9NUE0 388 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 GOLGA6AQ9NYA3 693 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 SAE1Q9UBE0 346 aaPredicted RBP16.36■□□□□ 0.21
MBD1-203ENST00000339998 CHRNA3P32297 505 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 HSPA9P38646 679 aaKnown RBP16.36■□□□□ 0.21
MBD1-203ENST00000339998 ATP1A2P50993 1020 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 SH3PXD2AQ5TCZ1 1133 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 CXCL17Q6UXB2 119 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 TMC3Q7Z5M5 1100 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 ARFGAP1Q8N6T3 406 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 SEC14L1Q92503 715 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 RAPGEF5Q92565 580 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 USP6NLQ92738 828 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 TMEM176AQ96HP8 235 aa16.36■□□□□ 0.21
MBD1-203ENST00000339998 FSCN2O14926 492 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 DARSP14868 501 aaKnown RBP16.35■□□□□ 0.21
MBD1-203ENST00000339998 EIF4BP23588 611 aaKnown RBP16.35■□□□□ 0.21
MBD1-203ENST00000339998 PSMC1P62191 440 aaKnown RBP16.35■□□□□ 0.21
MBD1-203ENST00000339998 TAF5Q15542 800 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 MFSD7Q6UXD7 560 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 ACOT1Q86TX2 421 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 GOLGA6L1Q8N7Z2 621 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.35■□□□□ 0.21
MBD1-203ENST00000339998 FMO2Q99518 471 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 SYNCQ9H7C4 482 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 ZWILCHQ9H900 591 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 METTL5Q9NRN9 209 aaKnown RBP16.35■□□□□ 0.21
MBD1-203ENST00000339998 CTSHP09668 335 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 SNX17Q15036 470 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 ZNF410Q86VK4 478 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 RHOT1Q8IXI2 618 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 WNT8BQ93098 351 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 CCDC114Q96M63 670 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 SH3GL2Q99962 352 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 PARP2Q9UGN5 583 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 PCSK1NQ9UHG2 260 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 MTUS1Q9ULD2 1270 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 MANSC4A6NHS7 340 aaPredicted RBP16.35■□□□□ 0.21
MBD1-203ENST00000339998 PPP1R7Q15435 360 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 FSCN1Q16658 493 aaKnown RBP16.35■□□□□ 0.21
MBD1-203ENST00000339998 SLC27A1Q6PCB7 646 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 B4GALNT4Q76KP1 1039 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 CCDC25Q86WR0 208 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 GLIS1Q8NBF1 620 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 ARRDC4Q8NCT1 418 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 VCPIP1Q96JH7 1222 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 DPEP3Q9H4B8 488 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 PCYOX1Q9UHG3 505 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 ABT1Q9ULW3 272 aaKnown RBP16.35■□□□□ 0.21
MBD1-203ENST00000339998 SCINQ9Y6U3 715 aa16.35■□□□□ 0.21
MBD1-203ENST00000339998 LAMA3Q16787 3333 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 RRN3P2A6NIE6 340 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 SHBGP04278 402 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 IL1R2P27930 398 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 GRM5P41594 1212 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 SLC1A1P43005 524 aa16.34■□□□□ 0.21
MBD1-203ENST00000339998 AFF1P51825 1210 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms