RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 HEY2Q9UBP5 337 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 RIPK3Q9Y572 518 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 UMODL1Q5DID0 1318 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 KRT7P08729 469 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 PAX7P23759 505 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 GTF2BQ00403 316 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 TMEM62Q0P6H9 643 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 CCNG2Q16589 344 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 MROH9Q5TGP6 573 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 PCGF5Q86SE9 256 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 CCDC125Q86Z20 511 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 DNAAF3Q8N9W5 541 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 C3orf20Q8ND61 904 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 CCT6BQ92526 530 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 ATP2A3Q93084 1043 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 IFT122Q9HBG6 1241 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 CISHQ9NSE2 258 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 PCMTD2Q9NV79 361 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 A0A1W2PPM1 405 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 KRT37O76014 449 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 CENPCQ03188 943 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 BMPR2Q13873 1038 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 KCTD2Q14681 263 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 AMHR2Q16671 573 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 TDRD10Q5VZ19 366 aaKnown RBP11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 SPOCD1Q6ZMY3 1216 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 SYDE1Q6ZW31 735 aaPredicted RBP11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 MAP4K3Q8IVH8 894 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 ACAP3Q96P50 834 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 GBP5Q96PP8 586 aa11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.64□□□□□ -0.55
SEMA4D-201ENST00000339861 CAPN9O14815 690 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 CYP1A2P05177 515 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 ADSSP30520 456 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 HIRAP54198 1017 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 NR1H3Q13133 447 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 KLHL38Q2WGJ6 581 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 NUDCD3Q8IVD9 361 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 DCLK2Q8N568 766 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 ARMC2Q8NEN0 867 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 PPP4R1Q8TF05 950 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 RMDN2Q96LZ7 410 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 MAGEB18Q96M61 343 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 VPS11Q9H270 941 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 ARMCX1Q9P291 453 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 AGAP1Q9UPQ3 857 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 CLEC11AQ9Y240 323 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 YDJCA8MPS7 323 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 CFLARO15519 480 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 TNFSF9P41273 254 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 ANGEL2Q5VTE6 544 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 ZNF280CQ8ND82 737 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 HELQQ8TDG4 1101 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 PAFAH2Q99487 392 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 DMAC2Q9NW81 257 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 NUB1Q9Y5A7 615 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 ADORA2BP29275 332 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 CLCN3P51790 818 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 ATXN3P54252 364 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 MAMLD1Q13495 774 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 EFTUD2Q15029 972 aaKnown RBP eCLIP11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 ARID3BQ8IVW6 561 aaPredicted RBP11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 TMC2Q8TDI7 906 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 PPP1R13LQ8WUF5 828 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 GRAMD1AQ96CP6 724 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 AGAP3Q96P47 875 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 POLIQ9UNA4 740 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 TRIM49D1C9J1S8 452 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 GJB1P08034 283 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 SLC9A9Q8IVB4 645 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 SREK1Q8WXA9 508 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 TLCD1Q96CP7 247 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 OTUD5Q96G74 571 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 SCYL1Q96KG9 808 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 SPATA33Q96N06 139 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 MBOAT7Q96N66 472 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 MED10Q9BTT4 135 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 NIF3L1Q9GZT8 377 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 RXFP1Q9HBX9 757 aa11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 SMG5Q9UPR3 1016 aaKnown RBP11.63□□□□□ -0.55
SEMA4D-201ENST00000339861 CACNA1SQ13698 1873 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 H3BRJ5 948 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 LUC7L3O95232 432 aaKnown RBP11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 PGK2P07205 417 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 CCND1P24385 295 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 DSG3P32926 999 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 TFDP3Q5H9I0 405 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 C1orf146Q5VVC0 180 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 TCP10LQ8TDR4 215 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 LRRC19Q9H756 370 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 MANSC1Q9H8J5 431 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 SLC38A10Q9HBR0 1119 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 ZC3H7BQ9UGR2 993 aaKnown RBP11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 NOCTQ9UK39 431 aaKnown RBP11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 PLIN4Q96Q06 1357 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 PSTPIP1O43586 416 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 CREB3O43889 395 aa11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 STK10O94804 968 aaKnown RBP11.62□□□□□ -0.55
SEMA4D-201ENST00000339861 OATP04181 439 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms