RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 CAPN9O14815 690 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 CENPCQ03188 943 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 TAF5Q15542 800 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 PDK4Q16654 411 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 MAP4K3Q8IVH8 894 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 HIPK4Q8NE63 616 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 ACTL9Q8TC94 416 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 SLITRK1Q96PX8 696 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 TRIM56Q9BRZ2 755 aaKnown RBP16.98■□□□□ 0.31
SCARB1-202ENST00000339570 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
SCARB1-202ENST00000339570 STARD13Q9Y3M8 1113 aa16.98■□□□□ 0.31
SCARB1-202ENST00000339570 WDR64B1ANS9 1081 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 CST8O60676 142 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 HAUS5O94927 633 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 ENO1P06733 434 aaKnown RBP16.97■□□□□ 0.31
SCARB1-202ENST00000339570 ZCCHC18P0CG32 403 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 GPX6P59796 221 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 NOMO3P69849 1222 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 OTUD4Q01804 1114 aaKnown RBP16.97■□□□□ 0.31
SCARB1-202ENST00000339570 MOGSQ13724 837 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 BAATQ14032 418 aaPredicted RBP16.97■□□□□ 0.31
SCARB1-202ENST00000339570 TMEM132AQ24JP5 1023 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 WDR72Q3MJ13 1102 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 AGGF1Q8N302 714 aaeCLIP16.97■□□□□ 0.317e-7■■■■■ 27.5
SCARB1-202ENST00000339570 IWS1Q96ST2 819 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 SENP7Q9BQF6 1050 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 LRMDAQ9H2I8 198 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 SYNCQ9H7C4 482 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 BATF3Q9NR55 127 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 PSMC3IPQ9P2W1 217 aaPredicted RBP16.97■□□□□ 0.31
SCARB1-202ENST00000339570 LGALS13Q9UHV8 139 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 NRAPQ86VF7 1730 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 ZNF541Q9H0D2 1346 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 FAM237BA0A1B0GVD1 139 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 E2F8A0AVK6 867 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 RGL2O15211 777 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 TJP3O95049 919 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 SLC1A1P43005 524 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 NCKAP1LP55160 1127 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 BLMHQ13867 455 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 SGSM1Q2NKQ1 1148 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 CLNKQ7Z7G1 428 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 USP37Q86T82 979 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 ALYREFQ86V81 257 aaKnown RBP16.97■□□□□ 0.31
SCARB1-202ENST00000339570 CADM1Q9BY67 442 aaKnown RBP16.97■□□□□ 0.31
SCARB1-202ENST00000339570 MRPL47Q9HD33 250 aaKnown RBP16.97■□□□□ 0.31
SCARB1-202ENST00000339570 SERPINA10Q9UK55 444 aa16.97■□□□□ 0.31
SCARB1-202ENST00000339570 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.97■□□□□ 0.31
SCARB1-202ENST00000339570 YDJCA8MPS7 323 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 CUL2Q13617 745 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 CDO1Q16878 200 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 B3GNT9Q6UX72 402 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 NPNTQ6UXI9 565 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 SPOCD1Q6ZMY3 1216 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 WDR60Q8WVS4 1066 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 STMN2Q93045 179 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 GRAMD1AQ96CP6 724 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 FAM161BQ96MY7 647 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 TTC1Q99614 292 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 SPATS2LQ9NUQ6 558 aaKnown RBP16.96■□□□□ 0.31
SCARB1-202ENST00000339570 WASF2Q9Y6W5 498 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 ATRNL1Q5VV63 1379 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 CST3P01034 146 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-202ENST00000339570 KRT19P08727 400 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 MARK3P27448 753 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 ARFIP2P53365 341 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 YARSP54577 528 aaKnown RBP16.96■□□□□ 0.31
SCARB1-202ENST00000339570 THOC5Q13769 683 aaKnown RBP16.96■□□□□ 0.31
SCARB1-202ENST00000339570 TSNAXIP1Q2TAA8 658 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 PRAMEF18Q5VWM3 479 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 OGFOD1Q8N543 542 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 BBOF1Q8ND07 529 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 ZNF483Q8TF39 744 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-202ENST00000339570 PPP1R16BQ96T49 567 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 MSTO1Q9BUK6 570 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.96■□□□□ 0.318e-7■■□□□ 12.1
SCARB1-202ENST00000339570 NMRK1Q9NWW6 199 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 FBXO40Q9UH90 709 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 RIPK3Q9Y572 518 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 LPXNO60711 386 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 VNN1O95497 513 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 MT-ND3P03897 115 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 ESRRAP11474 423 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-202ENST00000339570 BMPR2Q13873 1038 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 PGM5Q15124 567 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 ABRAQ8N0Z2 381 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 ZNF606Q8WXB4 792 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 TSSK1BQ9BXA7 367 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 TMEM120AQ9BXJ8 343 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 MANSC1Q9H8J5 431 aa16.96■□□□□ 0.31
SCARB1-202ENST00000339570 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-202ENST00000339570 COL24A1Q17RW2 1714 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 NVLO15381 856 aaKnown RBP16.95■□□□□ 0.3
SCARB1-202ENST00000339570 GRAP2O75791 330 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 PYGBP11216 843 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 GNAT1P11488 350 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 TNFSF9P41273 254 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 RAP1GAPP47736 663 aa16.95■□□□□ 0.3
SCARB1-202ENST00000339570 SARNPP82979 210 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms