RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CCDC13Q8IYE1 715 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 ZDHHC14Q8IZN3 488 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 PPM1KQ8N3J5 372 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 GBP7Q8N8V2 638 aaPredicted RBP11.44□□□□□ -0.58
RTN3-201ENST00000338850 IPO4Q8TEX9 1081 aaKnown RBP11.44□□□□□ -0.58
RTN3-201ENST00000338850 HERVK_113Q902F9 699 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 SEMA4DQ92854 862 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 GLG1Q92896 1179 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 TIFAQ96CG3 184 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 VWCEQ96DN2 955 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 SNF8Q96H20 258 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 TAAR1Q96RJ0 339 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 MTG1Q9BT17 334 aaPredicted RBP11.44□□□□□ -0.58
RTN3-201ENST00000338850 PPANQ9NQ55 473 aaKnown RBP11.44□□□□□ -0.58
RTN3-201ENST00000338850 C1orf112Q9NSG2 853 aa11.44□□□□□ -0.58
RTN3-201ENST00000338850 TRMT13Q9NUP7 481 aaKnown RBP11.44□□□□□ -0.58
RTN3-201ENST00000338850 CXXC1Q9P0U4 656 aaPredicted RBP11.44□□□□□ -0.58
RTN3-201ENST00000338850 CFAP73A6NFT4 308 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 H0YHG0 523 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 O00370 1275 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 CHUKO15111 745 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 SLC16A4O15374 487 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 CYP26A1O43174 497 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 EXTL3O43909 919 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 OAS1P00973 400 aaKnown RBP11.43□□□□□ -0.58
RTN3-201ENST00000338850 FGBP02675 491 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 MMEP08473 750 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 SUPT20HL2P0C7V6 817 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 CYP2C9P11712 490 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 CHN1P15882 459 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 TBXAS1P24557 533 aaPredicted RBP11.43□□□□□ -0.58
RTN3-201ENST00000338850 PBX2P40425 430 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 AP3M2P53677 418 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 IFT88Q13099 833 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 NR1H3Q13133 447 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 KLF1Q13351 362 aaPredicted RBP11.43□□□□□ -0.58
RTN3-201ENST00000338850 AUHQ13825 339 aaKnown RBP11.43□□□□□ -0.58
RTN3-201ENST00000338850 SLC29A2Q14542 456 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 TTLL4Q14679 1199 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 NBPF20Q3BBV1 942 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 ZACNQ401N2 412 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 XKR9Q5GH70 373 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 LRRC38Q5VT99 294 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 SLC39A4Q6P5W5 647 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 CCDC62Q6P9F0 684 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 SV2AQ7L0J3 742 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 SLC47A2Q86VL8 602 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 VSIG10LQ86VR7 867 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 PHF13Q86YI8 300 aaPredicted RBP11.43□□□□□ -0.58
RTN3-201ENST00000338850 CBWD2Q8IUF1 395 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 CCDC105Q8IYK2 499 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 KATNAL2Q8IYT4 538 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 MCOLN2Q8IZK6 566 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 NSUN6Q8TEA1 469 aaKnown RBP11.43□□□□□ -0.58
RTN3-201ENST00000338850 TRAIPQ9BWF2 469 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 PBX4Q9BYU1 374 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 OSBPL7Q9BZF2 842 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 CENPHQ9H3R5 247 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 PCIF1Q9H4Z3 704 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 ZNF576Q9H609 170 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 MRPL47Q9HD33 250 aaKnown RBP11.43□□□□□ -0.58
RTN3-201ENST00000338850 KMT5AQ9NQR1 393 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 NEU2Q9Y3R4 380 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 SCINQ9Y6U3 715 aa11.43□□□□□ -0.58
RTN3-201ENST00000338850 ADGRA3Q8IWK6 1321 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 SCN10AQ9Y5Y9 1956 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 DENND3A2RUS2 1198 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 CCT8L1PA6NM43 557 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 TP73O15350 636 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 THAP12O43422 761 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 KPNA6O60684 536 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 PROSCO94903 275 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 CCNE2O96020 404 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 LDHAP00338 332 aaKnown RBP11.42□□□□□ -0.58
RTN3-201ENST00000338850 PSAPP07602 524 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 IVDP26440 423 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 TMOD1P28289 359 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 MCL1Q07820 350 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 RIPK1Q13546 671 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 CCNG2Q16589 344 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 UGCGQ16739 394 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 SGO2Q562F6 1265 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 LIN9Q5TKA1 542 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 SLFN12LQ6IEE8 588 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 ANO5Q75V66 913 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 MON1BQ7L1V2 547 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 OTOP2Q7RTS6 562 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 CPLX4Q7Z7G2 160 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 CCDC89Q8N998 374 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 ATL2Q8NHH9 583 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 EXD1Q8NHP7 514 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.42□□□□□ -0.58
RTN3-201ENST00000338850 PPP1R13LQ8WUF5 828 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 KAT5Q92993 513 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 ZBTB9Q96C00 473 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 DDX27Q96GQ7 796 aaKnown RBP11.42□□□□□ -0.58
RTN3-201ENST00000338850 SGSM3Q96HU1 749 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 SCLYQ96I15 445 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 RMDN3Q96TC7 470 aa11.42□□□□□ -0.58
RTN3-201ENST00000338850 DCLK3Q9C098 648 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms