RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 LDHAP00338 332 aaKnown RBP14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 CCNE1P24864 410 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 ASIC1P78348 528 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 POU5F1Q01860 360 aaKnown RBP14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 PLD1Q13393 1074 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 DDR2Q16832 855 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 SV2CQ496J9 727 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 ZNF852Q6ZMS4 543 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 NELFCDQ8IXH7 590 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 DCLK2Q8N568 766 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 CLDN23Q96B33 292 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 SLC46A2Q9BY10 475 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 MTMR12Q9C0I1 747 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 LMAN1LQ9HAT1 526 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 TRPV4Q9HBA0 871 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 GTF3C4Q9UKN8 822 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 DSEQ9UL01 958 aa14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.4□□□□□ -0.1
NUDCD3-201ENST00000338427 TCHHQ07283 1943 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 TGFB1I1O43294 461 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 PRPF40AO75400 957 aaKnown RBP14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 PRAMEF12O95522 483 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 F13A1P00488 732 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 CST3P01034 146 aaPredicted RBP14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 CYP2F1P24903 491 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 AFMP43652 599 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 TUFMP49411 452 aaKnown RBP14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 DNM1Q05193 864 aaKnown RBP14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 WDR44Q5JSH3 913 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 EPM2AIP1Q7L775 607 aaPredicted RBP14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 TMEM150AQ86TG1 271 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 GPD1LQ8N335 351 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 LEMD2Q8NC56 503 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 IRF7Q92985 503 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 C7orf25Q9BPX7 421 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 TNMDQ9H2S6 317 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 TMEM206Q9H813 350 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 INTS13Q9NVM9 706 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 DDX43Q9NXZ2 648 aaKnown RBP14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 ASB3Q9Y575 518 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 SNX9Q9Y5X1 595 aa14.39□□□□□ -0.11
NUDCD3-201ENST00000338427 F5P12259 2224 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 MYBPHLA2RUH7 354 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 SLC38A8A6NNN8 435 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 ARNTLO00327 626 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 LAMTOR5O43504 91 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 YEATS4O95619 227 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 F11P03951 625 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 PDGFRBP09619 1106 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 HMGA1P17096 107 aaKnown RBP14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 PAX3P23760 479 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 LMO2P25791 158 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 RBP5P82980 135 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 TNK2Q07912 1038 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 MTAPQ13126 283 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 CUL4BQ13620 913 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 SOWAHAQ2M3V2 549 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 NT5DC4Q86YG4 428 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 YAF2Q8IY57 180 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 DCP1BQ8IZD4 617 aaKnown RBP14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 IQUBQ8NA54 791 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 FAM3CQ92520 227 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 ZNF516Q92618 1163 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 DNASE1L2Q92874 299 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 ELMO3Q96BJ8 720 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 NELL2Q99435 816 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 OSBPL6Q9BZF3 934 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 GPR88Q9GZN0 384 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 SLC39A2Q9NP94 309 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 RBM12Q9NTZ6 932 aaKnown RBP14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 GTSE1Q9NYZ3 720 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 HSPBP1Q9NZL4 362 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 SERTAD1Q9UHV2 236 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 MAGED2Q9UNF1 606 aaPredicted RBP14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 PCDHB5Q9Y5E4 795 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 PIAS3Q9Y6X2 628 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 MIA3Q5JRA6 1907 aa14.38□□□□□ -0.11
NUDCD3-201ENST00000338427 FAM186AA6NE01 2351 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 TSC2P49815 1807 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 ZNF233A6NK53 670 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 HUS1O60921 280 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 LMNAP02545 664 aaKnown RBP14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 HSP90AA1P07900 732 aaKnown RBP14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 TMEM191BP0C7N4 346 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 ME1P48163 572 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 CYP2J2P51589 502 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 ALCAMQ13740 583 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 GAS6Q14393 721 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 TAF12Q16514 161 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 FAM26FQ5R3K3 315 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 TXNDC8Q6A555 127 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 TXNDC11Q6PKC3 985 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 ITIH5Q86UX2 942 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 SPPL2BQ8TCT7 592 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 DEPDC1BQ8WUY9 529 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 SCFD1Q8WVM8 642 aa14.37□□□□□ -0.11
NUDCD3-201ENST00000338427 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms