RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 LLGL2Q6P1M3 1020 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 LILRA6Q6PI73 481 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 TMEM184AQ6ZMB5 413 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 RTL10Q7L3V2 364 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 ENOSF1Q7L5Y1 443 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 KREMEN2Q8NCW0 462 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 KBTBD7Q8WVZ9 684 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 PABPC5Q96DU9 382 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 TNIP3Q96KP6 325 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 PCMTD1Q96MG8 357 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 RTP3Q9BQQ7 232 aa12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 UBE2TQ9NPD8 197 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 AFF4Q9UHB7 1163 aaKnown RBP12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 BARX2Q9UMQ3 279 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1-202ENST00000337841 SPATA31D3P0C874 917 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 ATF2P15336 505 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 HOXB8P17481 243 aaPredicted RBP12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 PTPN1P18031 435 aaKnown RBP12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 CD58P19256 250 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 ACAT1P24752 427 aaKnown RBP12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 GTF2F1P35269 517 aaKnown RBP eCLIP12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 RAP1GAPP47736 663 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 FANCCQ00597 558 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 ROR1Q01973 937 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 GCNT1Q02742 428 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 UVSSAQ2YD98 709 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 SLC39A12Q504Y0 691 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 INTS6LQ5JSJ4 861 aaKnown RBP12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 LIN9Q5TKA1 542 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 TRIM65Q6PJ69 517 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 SPATA31D4Q6ZUB0 917 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 CCDC149Q6ZUS6 474 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 RRAGAQ7L523 313 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 CRYBG2Q8N1P7 616 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 RNF214Q8ND24 703 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 OR10T2Q8NGX3 314 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 C2orf15Q8WU43 125 aaKnown RBP12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 SYT15Q9BQS2 421 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 SDCBP2Q9H190 292 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 CISHQ9NSE2 258 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 DZANK1Q9NVP4 752 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 CLDND1Q9NY35 253 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 GTF3C4Q9UKN8 822 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 PCDHB5Q9Y5E4 795 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 HCFC2Q9Y5Z7 792 aa12.71□□□□□ -0.37
SPTLC1-202ENST00000337841 PRRG1O14668 218 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 TPM3P06753 285 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 OR4Q2P0C623 313 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 EPCAMP16422 314 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 NDST1P52848 882 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 UBASH3AP57075 661 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 ADCY1Q08828 1119 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 INCA1Q0VD86 236 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 KCNMA1Q12791 1236 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 CTC1Q2NKJ3 1217 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 SMYD5Q6GMV2 418 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 PHLDB3Q6NSJ2 640 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 FAM171BQ6P995 826 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 RNF19BQ6ZMZ0 732 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 C4orf50Q6ZRC1 276 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 APTXQ7Z2E3 356 aaKnown RBP12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 LRRTM3Q86VH5 581 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 SPATA2LQ8IUW3 424 aaPredicted RBP12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 MYCBPAPQ8TBZ2 947 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 SPPL2BQ8TCT7 592 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 HLA-CQ95604 372 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 HEXIM2Q96MH2 286 aaKnown RBP12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 TMEM209Q96SK2 561 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 CYP4F11Q9HBI6 524 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 HSFX1Q9UBD0 423 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 APEX2Q9UBZ4 518 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 KIAA1257Q9ULG3 409 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 COG5Q9UP83 839 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 PCDHB4Q9Y5E5 795 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 ANK1P16157 1881 aa12.7□□□□□ -0.38
SPTLC1-202ENST00000337841 WDR27A2RRH5 827 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 MYBPHLA2RUH7 354 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 LINC01565O15544 149 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 CBFA2T2O43439 604 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 ATP2C2O75185 946 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 CILPO75339 1184 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 KCNC3Q14003 757 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 NR1I3Q14994 352 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 SYCP1Q15431 976 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 PPM1LQ5SGD2 360 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 KLHDC7AQ5VTJ3 777 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 ANKRD54Q6NXT1 300 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 ACOT1Q86TX2 421 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 ARHGEF19Q8IW93 802 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 TCEAL8Q8IYN2 117 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 ATAD1Q8NBU5 361 aa12.69□□□□□ -0.38
SPTLC1-202ENST00000337841 B3GALNT2Q8NCR0 500 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms