RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 SYDE1Q6ZW31 735 aaPredicted RBP9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 C12orf56Q8IXR9 622 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 IFT43Q96FT9 208 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 DUSP9Q99956 384 aaKnown RBP9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 HIPK3Q9H422 1215 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 MYH10P35580 1976 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 ANKRD31Q8N7Z5 1873 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 CNTNAP2Q9UHC6 1331 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 DDX43Q9NXZ2 648 aaKnown RBP9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 KPNA7A9QM74 516 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 KLRC4O43908 158 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 F9P00740 461 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 PLTPP55058 493 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 KIAA0319LQ8IZA0 1049 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 EFHBQ8N7U6 833 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 SLC7A14Q8TBB6 771 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 LMCD1Q9NZU5 365 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 E2F5Q15329 346 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 GJB7Q6PEY0 223 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 CCDC13Q8IYE1 715 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 DARSP14868 501 aaKnown RBP9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 SELPP16109 830 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 AP1B1Q10567 949 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 DHX34Q14147 1143 aaKnown RBP9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 LLGL1Q15334 1064 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 SMARCD1Q96GM5 515 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 ELOVL4Q9GZR5 314 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 RRN3Q9NYV6 651 aa9.8□□□□□ -0.84
FNDC3B-201ENST00000336824 PIK3R2O00459 728 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ARSHQ5FYA8 562 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ATP6V0D2Q8N8Y2 350 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 RUBCNQ92622 972 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 FBXO32Q969P5 355 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 KRT82Q9NSB4 513 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 AIPL1Q9NZN9 384 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 NOC2LQ9Y3T9 749 aaKnown RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 SF3B1O75533 1304 aaKnown RBP eCLIP9.79□□□□□ -0.844e-6■■■■■ 90.5
FNDC3B-201ENST00000336824 GOLGA8KD6RF30 607 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 CASP5P51878 434 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ECM1Q16610 540 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 NFIL3Q16649 462 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ZNF792Q3KQV3 632 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 MRPS31Q92665 395 aaKnown RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ZBTB45Q96K62 511 aaPredicted RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 GAD1Q99259 594 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 M0R2N6 131 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 CTCFP49711 727 aaPredicted RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 NCAPHQ15003 741 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 C10orf120Q5SQS8 335 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 SYT15Q9BQS2 421 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 HEMGNQ9BXL5 484 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ST6GALNAC4Q9H4F1 302 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 PCDHB5Q9Y5E4 795 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ASTN1O14525 1302 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 WNT7AO00755 349 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 PSMD3O43242 534 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 GRM5P41594 1212 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 KPNA2P52292 529 aaKnown RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 IRX5P78411 483 aaPredicted RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 JAG1P78504 1218 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 NOMO2Q5JPE7 1267 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 FAM171A1Q5VUB5 890 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 TMC7Q7Z402 723 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 VPS52Q8N1B4 723 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 C1orf131Q8NDD1 294 aaKnown RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 RNPC3Q96LT9 517 aaKnown RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 METTL5Q9NRN9 209 aaKnown RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 FAM187AA6NFU0 413 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 RTN3O95197 1032 aaPredicted RBP9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 MMEP08473 750 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 PPM1AP35813 382 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 MLH1P40692 756 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 GRIK3Q13003 919 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 TSHZ1Q6ZSZ6 1077 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 VCPIP1Q96JH7 1222 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 CDT1Q9H211 546 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 MED4Q9NPJ6 270 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.79□□□□□ -0.841e-9■□□□□ 11.1
FNDC3B-201ENST00000336824 OGFRQ9NZT2 677 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 TRIM66O15016 1216 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ARL4CP56559 192 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 SETDB1Q15047 1291 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 CEP85LQ5SZL2 805 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 SLC35C1Q96A29 364 aa9.79□□□□□ -0.84
FNDC3B-201ENST00000336824 ANKRD63C9JTQ0 380 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 SLC11A2P49281 568 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 MTF1Q14872 753 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 MDH1BQ5I0G3 518 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 PYROXD1Q8WU10 500 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 TTC25Q96NG3 672 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 TXNRD2Q9NNW7 524 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 FAM105AQ9NUU6 356 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 MSRAQ9UJ68 235 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 MTSS1O43312 755 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 PSTPIP1O43586 416 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 SRGAP2O75044 1071 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 SGPL1O95470 568 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 VIMP08670 466 aaKnown RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 ARL2P36404 184 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms