RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 RTN3O95197 1032 aaPredicted RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 POLBP06746 335 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 PLEKP08567 350 aaPredicted RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 MAPTP10636 758 aaKnown RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 ENO3P13929 434 aaPredicted RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 SLC9A1P19634 815 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 RPA1P27694 616 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 ATICP31939 592 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 DLG4P78352 724 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 CCDC153Q494R4 210 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 LUZP2Q86TE4 346 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 PPHLN1Q8NEY8 458 aaKnown RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 FEZF2Q8TBJ5 459 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 OSCP1Q8WVF1 389 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 TYW5A2RUC4 315 aaKnown RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 C2CD2LO14523 706 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 FCHO1O14526 889 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 SKAP2O75563 359 aaPredicted RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 TDP2O95551 362 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 ALAS1P13196 640 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 EPHB2P29323 1055 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 PEX3P56589 373 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 BNIP1Q12981 228 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 RGS21Q2M5E4 152 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 TRAF7Q6Q0C0 670 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 TSHZ1Q6ZSZ6 1077 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 USP49Q70CQ1 688 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 DHDDSQ86SQ9 333 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 ZCCHC9Q8N567 271 aaKnown RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 CCNYL1Q8N7R7 359 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 KYQ8NBH2 561 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 PSPC1Q8WXF1 523 aaKnown RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 RSPH1Q8WYR4 309 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 ART4Q93070 314 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 MTMR8Q96EF0 704 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 NDNQ99608 321 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 REEP2Q9BRK0 252 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 SSU72Q9NP77 194 aaKnown RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 THAP1Q9NVV9 213 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 M0QZ92 97 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 ATP6V1B1P15313 513 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 GPC3P51654 580 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 CLCN2P51788 898 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 PLOD1Q02809 727 aaPredicted RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 ZNF268Q14587 947 aaPredicted RBP6.96□□□□□ -1.3
CPEB4-202ENST00000334035 NTRK3Q16288 839 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 DGUOKQ16854 277 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 LRRC36Q1X8D7 754 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 C12orf60Q5U649 245 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 POTEGQ6S5H5 508 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 NT5DC3Q86UY8 548 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 ZNF786Q8N393 782 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 GALNT4Q8N4A0 578 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 BORCS5Q969J3 196 aa6.96□□□□□ -1.3
CPEB4-202ENST00000334035 SYNJ2BP-COX16A0A087WUM0 186 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 TRIM49D1C9J1S8 452 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 K7ERI5 159 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 DNALI1O14645 258 aaPredicted RBP6.95□□□□□ -1.3
CPEB4-202ENST00000334035 AIM2O14862 343 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 MAGEB2O15479 319 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 KATNA1O75449 491 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 VIL1P09327 827 aaKnown RBP6.95□□□□□ -1.3
CPEB4-202ENST00000334035 EIF2B2P49770 351 aaKnown RBP6.95□□□□□ -1.3
CPEB4-202ENST00000334035 NUDT2P50583 147 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 MYL6P60660 151 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 MDH1BQ5I0G3 518 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPEB4-202ENST00000334035 RTKN2Q8IZC4 609 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 DYNLL2Q96FJ2 89 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 DCLK3Q9C098 648 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 THAP2Q9H0W7 228 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 SEMA6BQ9H3T3 888 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 NINJ2Q9NZG7 142 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 COX16Q9P0S2 106 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 DNAJB4Q9UDY4 337 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 TUBGCP4Q9UGJ1 667 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 FEM1BQ9UK73 627 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 WDR37Q9Y2I8 494 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 AP3M1Q9Y2T2 418 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 PCDHA3Q9Y5H8 950 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 PNMA8CA0A1B0GUJ8 204 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 TMEM247A6NEH6 219 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 LSM8O95777 96 aaKnown RBP6.95□□□□□ -1.3
CPEB4-202ENST00000334035 MTTPP55157 894 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 RAB14P61106 215 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 GTF2IP78347 998 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 PRAMEP78395 509 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 BNC1Q01954 994 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 GRB10Q13322 594 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 PDK4Q16654 411 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 SGSM1Q2NKQ1 1148 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 DCAF15Q66K64 600 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 PDPK2PQ6A1A2 396 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 MYLK4Q86YV6 388 aaPredicted RBP6.95□□□□□ -1.3
CPEB4-202ENST00000334035 TMA16Q96EY4 203 aaKnown RBP6.95□□□□□ -1.3
CPEB4-202ENST00000334035 CNDP1Q96KN2 507 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 FAM111AQ96PZ2 611 aa6.95□□□□□ -1.3
CPEB4-202ENST00000334035 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
CPEB4-202ENST00000334035 TRIM45Q9H8W5 580 aaPredicted RBP6.95□□□□□ -1.3
CPEB4-202ENST00000334035 C17orf75Q9HAS0 396 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms