RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SERPINB12Q96P63 405 aa12.45□□□□□ -0.42
SHMT2-201ENST00000328923 PLIN2Q99541 437 aa12.45□□□□□ -0.42
SHMT2-201ENST00000328923 RIOK1Q9BRS2 568 aaKnown RBP12.45□□□□□ -0.42
SHMT2-201ENST00000328923 GLT8D2Q9H1C3 349 aa12.45□□□□□ -0.42
SHMT2-201ENST00000328923 LRRC4BQ9NT99 713 aa12.45□□□□□ -0.42
SHMT2-201ENST00000328923 HOXC10Q9NYD6 342 aa12.45□□□□□ -0.42
SHMT2-201ENST00000328923 LRP2BPQ9P2M1 347 aa12.45□□□□□ -0.42
SHMT2-201ENST00000328923 DCTN4Q9UJW0 460 aa12.45□□□□□ -0.42
SHMT2-201ENST00000328923 MINPP1Q9UNW1 487 aa12.45□□□□□ -0.42
SHMT2-201ENST00000328923 NEU2Q9Y3R4 380 aa12.45□□□□□ -0.42
SHMT2-201ENST00000328923 F8W8V4 182 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 PFDN6O15212 129 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 AQP9O43315 295 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 TBCAO75347 108 aaKnown RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 PEX2P28328 305 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 ATP5DP30049 168 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 CPA2P48052 419 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 RRP1BQ14684 758 aaKnown RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 CNGA3Q16281 694 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 NIPAL1Q6NVV3 410 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 PEX26Q7Z412 305 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 OR7G1Q8NGA0 311 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 PPP1R14CQ8TAE6 165 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 PIP4K2CQ8TBX8 421 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 CALML4Q96GE6 196 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 C2orf49Q9BVC5 232 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 MRPS26Q9BYN8 205 aaKnown RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 SPON1Q9HCB6 807 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 SACM1LQ9NTJ5 587 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 ZNF804BA4D1E1 1349 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 FAM170AA1A519 330 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 MAGEB2O15479 319 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 SPAG7O75391 227 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 ZBTB11O95625 1053 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 RARGP13631 454 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 DDX5P17844 614 aaKnown RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 SLC5A3P53794 718 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 MARSP56192 900 aaKnown RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 RAB15P59190 212 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 FOLH1Q04609 750 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 UBE4AQ14139 1066 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 KRT81Q14533 505 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 TLR1Q15399 786 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 PCSK7Q16549 785 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 TPTE2Q6XPS3 522 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 RNF111Q6ZNA4 994 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 USP43Q70EL4 1123 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 SV2BQ7L1I2 683 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 UBE2Q1Q7Z7E8 422 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 SLFN11Q7Z7L1 901 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 SLC38A6Q8IZM9 456 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 MYO1HQ8N1T3 1032 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 GALNT4Q8N4A0 578 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 CEP63Q96MT8 703 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 KANSL3Q9P2N6 904 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 MTRF1LQ9UGC7 380 aaKnown RBP12.44□□□□□ -0.42
SHMT2-201ENST00000328923 KLHL3Q9UH77 587 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 GRID1Q9ULK0 1009 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 COL4A3BPQ9Y5P4 624 aa12.44□□□□□ -0.42
SHMT2-201ENST00000328923 BAZ2BQ9UIF8 2168 aaKnown RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 A0A0A6YYK5 440 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 WTIPA6NIX2 430 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 SOBPA7XYQ1 873 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 A8MU76 341 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 C2CD2LO14523 706 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 PHF2O75151 1096 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 C6orf222P0C671 652 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 VEGFAP15692 232 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 CETN2P41208 172 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 RAP1GDS1P52306 607 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 AP3M2P53677 418 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 KLHL30Q0D2K2 578 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 ASIC2Q16515 512 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 TMEM63BQ5T3F8 832 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 TMC7Q7Z402 723 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 CTRCQ99895 268 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 B3GNT4Q9C0J1 378 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 PAIP1Q9H074 479 aaKnown RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 XAB2Q9HCS7 855 aaKnown RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 ARPP21Q9UBL0 812 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 RSL24D1Q9UHA3 163 aaKnown RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 CYTH3O43739 400 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 CHEK2O96017 543 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 CETPP11597 493 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 ZNF12P17014 697 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 PMLP29590 882 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 RFC4P35249 363 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 ACADSBP45954 432 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 GYG1P46976 350 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 NPEPPSP55786 919 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 CTAG1AP78358 180 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 FKBP3Q00688 224 aaKnown RBP12.43□□□□□ -0.42
SHMT2-201ENST00000328923 NDUFA5Q16718 116 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 OTOAQ7RTW8 1153 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 ADGRA1Q86SQ6 560 aa12.43□□□□□ -0.42
SHMT2-201ENST00000328923 DHDDSQ86SQ9 333 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms