RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 NAT9Q9BTE0 207 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 FBXL5Q9UKA1 691 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 TTC36A6NLP5 189 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 ADORA2AP29274 412 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 TYK2P29597 1187 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 RGS7P49802 495 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 SESN3P58005 492 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 ITIH5Q86UX2 942 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 MSL3Q8N5Y2 521 aaKnown RBP11.94□□□□□ -0.5
COL4A5-201ENST00000328300 PDCD7Q8N8D1 485 aaKnown RBP11.94□□□□□ -0.5
COL4A5-201ENST00000328300 TTC17Q96AE7 1141 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 CYP11B1P15538 503 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 SERPINB4P48594 390 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 PSEN2P49810 448 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 PTK6Q13882 451 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL4A5-201ENST00000328300 SLC30A5Q8TAD4 765 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 FOPNLQ96NB1 174 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 WDR24Q96S15 920 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 CENPKQ9BS16 269 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 HDAC6Q9UBN7 1215 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 COL1A2P08123 1366 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 CFAP99D6REC4 459 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 PDGFRBP09619 1106 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 MTF1Q14872 753 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 TMEM132BQ14DG7 1078 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 ACAP1Q15027 740 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 LLGL1Q15334 1064 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 MGAT5BQ3V5L5 792 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 JAMLQ86YT9 394 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 A1CFQ9NQ94 594 aaKnown RBP11.94□□□□□ -0.5
COL4A5-201ENST00000328300 USP27XA6NNY8 438 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 IGF2BP3O00425 579 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL4A5-201ENST00000328300 LYPLA2O95372 231 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 PYGLP06737 847 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 INSRRP14616 1297 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 SPRP35270 261 aaPredicted RBP11.94□□□□□ -0.5
COL4A5-201ENST00000328300 ACVR2BQ13705 512 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 VGLL4Q14135 290 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 TMEM86AQ8N2M4 240 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 TMEM176AQ96HP8 235 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 METTL5Q9NRN9 209 aaKnown RBP11.94□□□□□ -0.5
COL4A5-201ENST00000328300 LRRC4BQ9NT99 713 aa11.94□□□□□ -0.5
COL4A5-201ENST00000328300 RALBP11234 206 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 GGCXP38435 758 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 OCRLQ01968 901 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 NCAPHQ15003 741 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 SH3RF1Q7Z6J0 888 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 TLK2Q86UE8 772 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 ZNF557Q8N988 423 aaPredicted RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 C1orf131Q8NDD1 294 aaKnown RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 AIPL1Q9NZN9 384 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 CPA4Q9UI42 421 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 PLIN4Q96Q06 1357 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 GMNCA6NCL1 334 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 UNCXA6NJT0 531 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 FAM86B1E9PN63 330 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 F8VZ95 297 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 CYB561D2O14569 222 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 BNIP3LO60238 219 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 POLBP06746 335 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 FAM86B2P0C5J1 330 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 SLC13A5Q86YT5 568 aaPredicted RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 AMACRQ9UHK6 382 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 TTC7AQ9ULT0 858 aaPredicted RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 APOA4P06727 396 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 WEE2P0C1S8 567 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 BRD2P25440 801 aaKnown RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 CREMQ03060 361 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 FBXO47Q5MNV8 452 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 ZC3H18Q86VM9 953 aaKnown RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 NUDCD3Q8IVD9 361 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 PDCD6IPQ8WUM4 868 aaKnown RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 MAML1Q92585 1016 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 RBM15Q96T37 977 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 CNPY3Q9BT09 278 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 WWP1Q9H0M0 922 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 KCNF1Q9H3M0 494 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 NRCAMQ92823 1304 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 URODP06132 367 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 KRT16P08779 473 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 MAGOHP61326 146 aaKnown RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 TMEM62Q0P6H9 643 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 HNRNPLLQ8WVV9 542 aaKnown RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 SH2D3AQ9BRG2 576 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 ERP44Q9BS26 406 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 FUCA2Q9BTY2 467 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 SEZ6LQ9BYH1 1024 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 FAM49BQ9NUQ9 324 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 INTS13Q9NVM9 706 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 ZC3H7BQ9UGR2 993 aaKnown RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 BARX2Q9UMQ3 279 aaPredicted RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 RPSAP08865 295 aaKnown RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 ZNF268Q14587 947 aaPredicted RBP11.93□□□□□ -0.5
COL4A5-201ENST00000328300 ACCSLQ4AC99 568 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
COL4A5-201ENST00000328300 EXD1Q8NHP7 514 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms