RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 MORF4L2Q15014 288 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 ACBD5Q5T8D3 534 aaPredicted RBP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 RNASEH2BQ5TBB1 312 aaKnown RBP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 ANKMY2Q8IV38 441 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 MCOLN2Q8IZK6 566 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 CCDC24Q8N4L8 307 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 CBWD1Q9BRT8 395 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 LOXHD1Q8IVV2 1947 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 FAM237BA0A1B0GVD1 139 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 E5RJQ4 531 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 PSTPIP1O43586 416 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 TMCC1O94876 653 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 PROSCO94903 275 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 IL1BP01584 269 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 SETSIPP0DME0 302 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 DEUP1Q05D60 604 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 GPS1Q13098 491 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 TFDP1Q14186 410 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 R3HDM1Q15032 1099 aaKnown RBP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 HSF5Q4G112 596 aaPredicted RBP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 SFT2D3Q587I9 215 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 KATNAL2Q8IYT4 538 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 MIPOL1Q8TD10 442 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 HELQQ8TDG4 1101 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
CCDC60-201ENST00000327554 PAFAH2Q99487 392 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 BLOC1S6Q9UL45 172 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 POLIQ9UNA4 740 aa13.44□□□□□ -0.26
CCDC60-201ENST00000327554 XIRP1Q702N8 1843 aaKnown RBP13.43□□□□□ -0.26
CCDC60-201ENST00000327554 DENND3A2RUS2 1198 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 PMM2O15305 246 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 UNGP13051 313 aaPredicted RBP13.43□□□□□ -0.26
CCDC60-201ENST00000327554 CD58P19256 250 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 BGNP21810 368 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 GLRA2P23416 452 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 C6orf163Q5TEZ5 329 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 CCDC174Q6PII3 467 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 RNF111Q6ZNA4 994 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 CENPUQ71F23 418 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 DAW1Q8N136 415 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 OGFOD1Q8N543 542 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 ALLCQ8N6M5 410 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 FAM172AQ8WUF8 416 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 DCAKDQ8WVC6 231 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 DHX38Q92620 1227 aaKnown RBP13.43□□□□□ -0.26
CCDC60-201ENST00000327554 ALKBH8Q96BT7 664 aaKnown RBP13.43□□□□□ -0.26
CCDC60-201ENST00000327554 THTPAQ9BU02 230 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 BTG4Q9NY30 223 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 CLIC5Q9NZA1 410 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 WRAP73Q9P2S5 460 aaPredicted RBP13.43□□□□□ -0.26
CCDC60-201ENST00000327554 CIDEBQ9UHD4 219 aa13.43□□□□□ -0.26
CCDC60-201ENST00000327554 FKBP6O75344 327 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 CCDC166P0CW27 439 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 UQCRBP14927 111 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 SSTR1P30872 391 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 MED21Q13503 144 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 EAPPQ56P03 285 aaPredicted RBP13.42□□□□□ -0.26
CCDC60-201ENST00000327554 C1orf146Q5VVC0 180 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 OTOP1Q7RTM1 612 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 RASSF3Q86WH2 238 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 RHOT1Q8IXI2 618 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 SLC25A41Q8N5S1 370 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 SHKBP1Q8TBC3 707 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 MTBPQ96DY7 904 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 RHBDL2Q9NX52 303 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 PTTG2Q9NZH5 202 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 GAKO14976 1311 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 IGLV3-22A0A075B6J6 115 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 HPCAP84074 193 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCDC60-201ENST00000327554 C2CD6Q53TS8 623 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 MDH1BQ5I0G3 518 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 KYAT3Q6YP21 454 aaKnown RBP13.42□□□□□ -0.26
CCDC60-201ENST00000327554 EXD1Q8NHP7 514 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 TMEM174Q8WUU8 243 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 LZICQ8WZA0 190 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 FAM81BQ96LP2 452 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 KCNQ5Q9NR82 932 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 CNTN3Q9P232 1028 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 STRIP2Q9ULQ0 834 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 SHOC2Q9UQ13 582 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 MYH9P35579 1960 aaKnown RBP13.42□□□□□ -0.26
CCDC60-201ENST00000327554 SMCHD1A6NHR9 2005 aa13.42□□□□□ -0.26
CCDC60-201ENST00000327554 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 CHMP2AO43633 222 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 ADRB2P07550 413 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 GAD2Q05329 585 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 ASPHQ12797 758 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 ITGA9Q13797 1035 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 SH2D4BQ5SQS7 431 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 AAGABQ6PD74 315 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 DRICH1Q6PGQ1 229 aaPredicted RBP13.41□□□□□ -0.26
CCDC60-201ENST00000327554 DHDDSQ86SQ9 333 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 C12orf56Q8IXR9 622 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 ELMO3Q96BJ8 720 aa13.41□□□□□ -0.26
CCDC60-201ENST00000327554 DNAJC1Q96KC8 554 aaKnown RBP13.41□□□□□ -0.26
CCDC60-201ENST00000327554 WDR83Q9BRX9 315 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms