RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 MCEEQ96PE7 176 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 HINFPQ9BQA5 517 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 TMEM60Q9H2L4 133 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 RASSF4Q9H2L5 321 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 ARHGEF38Q9NXL2 777 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 SELENONQ9NZV5 590 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 DISP2A7MBM2 1401 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 ZNF263O14978 683 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 LUC7L3O95232 432 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 MAPTP10636 758 aaKnown RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 MYL4P12829 197 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 GUCY2CP25092 1073 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 ARSEP51690 589 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 SESN2P58004 480 aaPredicted RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 PHKG1Q16816 387 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 PPM1LQ5SGD2 360 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 IZUMO3Q5VZ72 239 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 MIB1Q86YT6 1006 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 WDR49Q8IV35 697 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 L3MBTL3Q96JM7 780 aaPredicted RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 ZNF558Q96NG5 402 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 GOLPH3LQ9H4A5 285 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 KCNQ5Q9NR82 932 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 GIMAP4Q9NUV9 329 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 AKAP7Q9P0M2 348 aaPredicted RBP9.38□□□□□ -0.91
CD28-201ENST00000324106 RAB23Q9ULC3 237 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 SPACA6W5XKT8 324 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 NRCAMQ92823 1304 aa9.38□□□□□ -0.91
CD28-201ENST00000324106 LRRIQ3A6PVS8 624 aaPredicted RBP9.37□□□□□ -0.91
CD28-201ENST00000324106 TBC1D12O60347 775 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 ESRRAP11474 423 aaPredicted RBP9.37□□□□□ -0.91
CD28-201ENST00000324106 SERPINB9P50453 376 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 MAPRE2Q15555 327 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 ZPBP2Q6X784 338 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 DNAJB3Q8WWF6 145 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 PTPRN2Q92932 1015 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 BTBD6Q96KE9 485 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 DCLK3Q9C098 648 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 CCDC85CA6NKD9 419 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 LAMTOR4Q0VGL1 99 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 TEDDM1Q5T9Z0 273 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 UGT3A1Q6NUS8 523 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 DHX40Q8IX18 779 aaKnown RBP9.37□□□□□ -0.91
CD28-201ENST00000324106 MAML1Q92585 1016 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 SYT17Q9BSW7 474 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 YIPF2Q9BWQ6 316 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 CIPCQ9C0C6 399 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 NOVA2Q9UNW9 492 aaKnown RBP9.37□□□□□ -0.91
CD28-201ENST00000324106 CHUKO15111 745 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 MAPK13O15264 365 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 RTN3O95197 1032 aaPredicted RBP9.37□□□□□ -0.91
CD28-201ENST00000324106 APRTP07741 180 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 INPP1P49441 399 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 CDR2LQ86X02 465 aaPredicted RBP9.37□□□□□ -0.91
CD28-201ENST00000324106 CPA5Q8WXQ8 436 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 CYFIP2Q96F07 1278 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 RNPC3Q96LT9 517 aaKnown RBP9.37□□□□□ -0.91
CD28-201ENST00000324106 NDE1Q9NXR1 346 aa9.37□□□□□ -0.91
CD28-201ENST00000324106 G3BP2Q9UN86 482 aaKnown RBP9.37□□□□□ -0.91
CD28-201ENST00000324106 C2orf81A6NN90 581 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 M0QYT0 321 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 DCTN3O75935 186 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 CKBP12277 381 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 DNAJB2P25686 324 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 ATP6V1E1P36543 226 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 GEMP55040 296 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 ABCE1P61221 599 aaKnown RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 MDM2Q00987 491 aaPredicted RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 ZNF211Q13398 564 aaPredicted RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 HIST2H2ACQ16777 129 aaPredicted RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 IRAK1BP1Q5VVH5 260 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 HIST2H2AA3Q6FI13 130 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 CATSPERGQ6ZRH7 1159 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 ZBED8Q8IZ13 594 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.36□□□□□ -0.91
CD28-201ENST00000324106 CCDC138Q96M89 665 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 AGAP3Q96P47 875 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 A1CFQ9NQ94 594 aaKnown RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 SYF2O95926 243 aaKnown RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 ZNF286BP0CG31 522 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 GALCP54803 685 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 PTPN21Q16825 1174 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 EFL1Q7Z2Z2 1120 aaKnown RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 METTL16Q86W50 562 aaKnown RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 FEZF2Q8TBJ5 459 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 SPIRE2Q8WWL2 714 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 TRAIPQ9BWF2 469 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 PYCARDQ9ULZ3 195 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 SLC12A8A0AV02 714 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 HEATR9A2RTY3 570 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 WDR91A4D1P6 747 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 ACKR2O00590 384 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 IRF6O14896 467 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 DNAJC8O75937 253 aaPredicted RBP9.36□□□□□ -0.91
CD28-201ENST00000324106 OSCP1Q8WVF1 389 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 OSBPL9Q96SU4 736 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 SYT15Q9BQS2 421 aa9.36□□□□□ -0.91
CD28-201ENST00000324106 KRT82Q9NSB4 513 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms